| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2368 |
|---|
| Symbol | |
|---|
| ID | 8754039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 2457997 |
|---|
| End bp | 2458863 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | Peptidoglycan-binding lysin domain protein |
|---|
| Protein accession | YP_003409415 |
|---|
| Protein GI | 284990861 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.238108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGC ACCGCGCACC CCGCTATGTC CGCACCAAGA AGGTCCTCGC CAAGGCCCCG
GTCGCAGCCG GCGCCACGGT CGTCGGCTTC GGCGTCCTGA GCTCCCCGGC CCAGGCCTTC
GCCGGGACCA CCGTCCTCGC CCACGCCGTC GAGGTCCCCG CCGCGACGCC GGCCGCGAAC
AGCGGCACCG CCGCTCCTGA GGCCGACCAC ACCGTCGAGC ACGGTGACAC GATCGCGAAG
ATCGCCGCCG CCCACGGCCA GTCGTGGCGC GAGCTGTACC AGCGCAACGC CGGCGTCATC
GGCGCCGACC CGAACCGGAT CCTCCCGGGG CAGGTCCTGC TCACCGCCGG CTCGGCCGCC
GCCCACGCGG CTCCGGCCGC CCCGGCTCCC ATCGCCGGCT CGGCCGGGAA CGCGGCGCCC
GCGGCGGCGG TCGCCCCGCT CGCGGCGGTG GCTCCGGCGC CCGCGGCGGC TCCGGCTCCC
GTGGCCGCGG CGGCCTCGGC TGCCACCGCG CGCATCACCA ACAGCGCCGG CGACGTGGCC
CCGCAGGTGC GGGCCGCGGC CAACCGGGTG GTCAGCGAGG TGCCCGGCGC CGACTCGATC
ACCATCGGCG GCACCCGGGC GAGCGCGACC GACCCGAACG GCCACCCGTC CGGCCTGGCG
CTGGACTACA TGGTCGGTTC CGACTCCGCT CTCGGGGACG CGATCGTGGC CTTCCACATC
GCCCACTGGG ACGAGCTGGG CGTCGAGTAC GTCATCTGGG AGCAGCGGAT CCTGACCTCG
CCGACCGGCG CGTGGAAGGC CATGGCCGAC CGCGGCAGCG CCACGGCGAA CCACATGGAC
CACCCGCACG TGAACTACGT CGGCTGA
|
|---|
| Protein sequence | MAKHRAPRYV RTKKVLAKAP VAAGATVVGF GVLSSPAQAF AGTTVLAHAV EVPAATPAAN
SGTAAPEADH TVEHGDTIAK IAAAHGQSWR ELYQRNAGVI GADPNRILPG QVLLTAGSAA
AHAAPAAPAP IAGSAGNAAP AAAVAPLAAV APAPAAAPAP VAAAASAATA RITNSAGDVA
PQVRAAANRV VSEVPGADSI TIGGTRASAT DPNGHPSGLA LDYMVGSDSA LGDAIVAFHI
AHWDELGVEY VIWEQRILTS PTGAWKAMAD RGSATANHMD HPHVNYVG
|
|---|
| |