| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2339 |
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| Symbol | |
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| ID | 8754010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geodermatophilus obscurus DSM 43160 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013757 |
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| Strand | - |
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| Start bp | 2427311 |
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| End bp | 2430067 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003409387 |
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| Protein GI | 284990833 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00297311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCCA GCCGCCCCGC CGGAACCGAG ACCGTGGAGG GCGCCGTCCC CGGGGACGGT
GCCTTCTCGC ACCGGCAGGT GCTGACCGTC CTGGCCGGGT TGATGGCCGC CATGTTCTTG
GCCGCGCTCG ACCAGACGAT CGTGGCGACA GCCGTCCGCA CCATCGCCGA CGACCTCGAC
GGCTTCTCGC TGCAGGCCTG GGCGACGACG GCCTTCCTGA TCACCTCGAC GATCTCGACC
CCGCTCTACG GCAAGCTCTC CGACCTCTAC GGGCGGCGGC CGCTCTACCT GTTCGCGATC
TCGGTGTTCA TCGGCGGCTC GGTGTGCTGC GGCGTCGCCG ACTCGATGTA CCAGCTGGCG
GCCGCCCGGG CGGTGCAGGG GGTCGGCGCC GGCGGGCTGA TGTCGCTGGC CCTGGCGATC
ATCGGCGACA TGGTCCCGCC CCGGGAGCGC TCGCGCTACC AGGGCTACAC CATGGCCGTC
TGGGGCAGCT CGAGCGTGCT GGGCCCGGTC CTCGGCGGCC TTCTGGCCGG CCAGGAGTCC
CTGTTCGGCG TCGACGGGTG GCGCTGGATC TTCCTGGTCA ACGTCCCGCT GGGCGCGGTG
GCGTTCACCA TTGTCTTCCG CGTCCTGCAC CTGCCCCACG AGCGGCGCGA CCACCGCATC
GACTGGCCGG GCGCGCTGGC GCTGACCACC TGCGCGGTAC CGCTGCTCGT CGTCGCCGAG
CAGGGCCGCG GATGGGGCTG GACCTCGCCG GCGGCGCTGG TCTGCTACGC GCTCGGCGCC
GCCGGCCTGG GCGCGTTCGT GCTCGCCGAA CGGGCCTACG GTGACGACGC GCTGCTCCCG
CTGCGGTTGT TCGGGAACCG CACCTTCGTC GTCACCGCCC TGGGCAGCAT CGTGCTGGGC
GCGGGGATGC TGGGCGGCCT GCTGCTGATC CCCCAGTACC TGCAGATCGT GCACGGCTCG
AGTCCCACGG TCGCCGGCCT GCAGATGCTC CCCCTGGTCG CCGGGATCAT GGCCGGGGCG
GGGAGCTCGG GCGTCGCGAT CTCCAAGACG GGCCGCTACC GGCAGTTCCC GCTGCTCGGT
GTGGGACTGA TGGCCACGGC GCTGTTCGGC TTCTCCAGGG TCGCCGGTGC CGACACGCCC
TACGGGTTGC TGGTGCCGTT CCTGGCGATG TTCGGCGTGG GCGTCGGCTT CACGTTCCAG
CCGGTCGTCG TGGCGGTGCA GAGCGCCGTG CGCCCCTGGG AGATCGGGGT GGCCACCTCC
TCGGTGGCCT TCTTCCGCCA GACGGGCGCC ACCGTGGGCA CTGCAGCGTT CCTCTCCCTG
CTGTTCGCCC GGCTGCCCGG CGAGGTCGAC GGCGCGGTGC AGGACGCCGT CCGCGCCGAC
CCCGGGCTGG CGCCCCGGCT CCAGCCGCTC GACGGGGTCG GCTCCGACCT CTCCGACAGC
TCCTTCGTCC AGCAGCTCCC CGACGCGGTC GCCGAGCCCT TCCGGGCCGG CTTCGCCGGG
TCCGTGGACC TGGTGCTGCT CGTCGTCGCC GGCGTGGTGG CCGTGGGCGC CGCCGTCTTC
CTGTTCCTGC CGCAGCTGAC GCTGTCGACC GAGTCCGGCA TCCAGGCCCG CCGGAGCGCG
GCCCGGGCCG CCGGCTCCCT GCCCACGACG GCCCCCGCTG CTCCCACCCC CACCCGCCAG
GGCACCCGGG GCCGGCCACG CGTCCTCCCC GGCCTCCCGG CGCGCCGGGA CGTGACCCGT
GCGGCGACGG TCGCCCCCCG CCGGGGACCG AGCCGGGAAC TGGTCTTGGC CGGCGCGGCC
GCGCTCGGGC TCCTGCTGGG CCTCGGCGGG GTGGCGCTGG GCTCCCGCCC CGCGGCCACC
GGGGAGGGGC CGCCGGCCTC CGGGCTCCCC GACGGGGCGC TGCCGGCCGC CCCCCTCCCC
GGCTCGGTCC CCGGCGGGGG TCTGGCGGCT CCGGACGGCG GGACGCAGGA GGAGACGCCG
TCACCGCAGG CGCCGTCGCG ACGCCCGGCC ACGGCGCCGG GCACTCCCAC GACGACCGCG
TCCCCGACCT CCGGCGGCGC CGTCAGGTCC TCCGCCCCGG TCGGCACGAG CAGCGGTCCG
GTGAGCTCCG GCACGAGCGC GGCCGCGCCC GGCGGCGAGG CCACGAGCGC GGGTTCGGCG
AACTCCGGGA CGACGAGCTC CGGCACGACG AGCTCCGGCA CGACGAGCTC CGGCACGACG
AGCTCCGGCA CGACGAGCTC CGGCACGACG AGCTCCGGCA CGACGAGCTC CGGCACGACG
AGCTCGGGCA CGACGAGCTC CGGCACGACG AGCTCCGGGA CCTCCGCAGC GACTCCCTCC
GGCGCGACGG CCACGTCCAC GCCGACACCC AGCCCCACAC CGACACCCAG CCCCACACCG
ACACCCAGCC CCACACCGAC ACCCAGCCCC ACACCGACAC CCAGCCCCAC ACCGACACCC
AGCCCCACAC CGACACCCAG CCCCACACCG ACACCCAGCC CCACACCGAC ACCCAGCCCC
ACACCGACCG AGCAGCCGAC CGCAACGGCC ACCGCAACCG CGACGCCCAC CGCAACAGCG
ACGCCCACCG AGACTCCCGA GCCGACGGCG ACCACGGACC CCACCGAGAC CACGGACCCC
ACCGAGACCA CGGACCCCAC CGAGACCACG GACCCCACCG AGACCACGGA CCCCACCGAG
ACCACGGACC CCACCGAGAC GGAGACGCCC GCAGGGACCG CCACGGCCAC GCCCTGA
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| Protein sequence | MNPSRPAGTE TVEGAVPGDG AFSHRQVLTV LAGLMAAMFL AALDQTIVAT AVRTIADDLD
GFSLQAWATT AFLITSTIST PLYGKLSDLY GRRPLYLFAI SVFIGGSVCC GVADSMYQLA
AARAVQGVGA GGLMSLALAI IGDMVPPRER SRYQGYTMAV WGSSSVLGPV LGGLLAGQES
LFGVDGWRWI FLVNVPLGAV AFTIVFRVLH LPHERRDHRI DWPGALALTT CAVPLLVVAE
QGRGWGWTSP AALVCYALGA AGLGAFVLAE RAYGDDALLP LRLFGNRTFV VTALGSIVLG
AGMLGGLLLI PQYLQIVHGS SPTVAGLQML PLVAGIMAGA GSSGVAISKT GRYRQFPLLG
VGLMATALFG FSRVAGADTP YGLLVPFLAM FGVGVGFTFQ PVVVAVQSAV RPWEIGVATS
SVAFFRQTGA TVGTAAFLSL LFARLPGEVD GAVQDAVRAD PGLAPRLQPL DGVGSDLSDS
SFVQQLPDAV AEPFRAGFAG SVDLVLLVVA GVVAVGAAVF LFLPQLTLST ESGIQARRSA
ARAAGSLPTT APAAPTPTRQ GTRGRPRVLP GLPARRDVTR AATVAPRRGP SRELVLAGAA
ALGLLLGLGG VALGSRPAAT GEGPPASGLP DGALPAAPLP GSVPGGGLAA PDGGTQEETP
SPQAPSRRPA TAPGTPTTTA SPTSGGAVRS SAPVGTSSGP VSSGTSAAAP GGEATSAGSA
NSGTTSSGTT SSGTTSSGTT SSGTTSSGTT SSGTTSSGTT SSGTTSSGTT SSGTSAATPS
GATATSTPTP SPTPTPSPTP TPSPTPTPSP TPTPSPTPTP SPTPTPSPTP TPSPTPTPSP
TPTEQPTATA TATATPTATA TPTETPEPTA TTDPTETTDP TETTDPTETT DPTETTDPTE
TTDPTETETP AGTATATP
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