| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2038 |
|---|
| Symbol | |
|---|
| ID | 8753709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 2115164 |
|---|
| End bp | 2118055 |
|---|
| Gene Length | 2892 bp |
|---|
| Protein Length | 963 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | excinuclease ABC, A subunit |
|---|
| Protein accession | YP_003409097 |
|---|
| Protein GI | 284990543 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.225095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCC TCGTCGTCCG CGGCGCCCGC GAGCACAACC TCAAGGACGT CAACCTCGAC
CTGCCCCGCG ACGCGCTGAT CGTGTTCACG GGGCTGTCCG GCTCGGGGAA GTCCAGCCTC
GCCTTCGACA CGATCTTCGC CGAGGGTCAG CGCCGCTACG TCGAGTCGCT GTCGGCCTAC
GCCCGCCAGT TCCTGGGCCA GATGGACAAG CCCGACGTCG ACTTCATCGA GGGGCTCTCA
CCGGCCGTCT CGATCGACCA GAAGTCCACC AACCGCAACC CGCGGTCGAC CGTCGGCACG
ATCACCGAGG TCTACGACTA CCTGCGGCTG CTCTACGCCC GCGCCGGCCA GCCGCACTGC
CCCAACTGCG GCAAGCCGAT CTCCCGGCAG ACCCCGCAGC AGATCGTCGA CCAGGTGCTG
GCGATGGAGG AAGGCACCCG CTTCCAGGTG CTCGCCCCCG TCGTCCGGGC CCGCAAGGGC
GAGTACGTCG ACCTGTTCAG CTCGCTGCAG ACCCAGGGCT TCTCCCGGGT CCGCGTCGAC
GGCGTCGTCC ACCAGCTGAC CGACCCGCCG AAGCTGAAGA AGCAGGAGAA GCACACGATC
GAGGTGATCG TCGACCGGCT CACCGTCAAG GAGAGCGCGA AGCGGCGGCT CACCGACTCG
GTCGAGACGG CGCTGGGCCT GGCCGGCGGT CTCGTCGTCC TCGACTTCGT CGACCTGCCC
GAGGACGACC CGCAGCGCGA GCGCACCTTC TCCGAGCACC TGGCCTGCGT GGACGACGGG
TTGTCCTTCG AGGCGCTCGA GCCGCGGTCG TTCTCCTTCA ACTCGCCGTT CGGCGCCTGC
CCCGAGTGCA CCGGCATCGG CACCCGCAAG GAGGTCGACC CCGACCTCGT CGTGCCGGAC
TCCGAGAAGA GCCTGGCGCA GGGCGCGATC GCCCCGTGGG CGACCTCGAT GAGCAACGAG
TACTTCACCC GGCTGCTCAC CGGTCTCTCG CAGCAGCTCG GCTTCTCCAT GGACGACCCG
TGGGGGCGGC TGCCGGCCAG GGTGCAGAAG GCGGTCCTGC ACGGCTCGCC GGACCAGGTG
CACGTCCGCT ACAAGAACCG CTACGGCCGC GAGCGCAGCT ACTACGCCGC CTTCGAGGGC
GTGCTGCCCT TCCTCGAGCG GCGGCACGAG GACACCGACA GCGAGTACAT GCGGGACAAG
TACGAGGGCT ACATGCGCGA CGTGCCCTGC CCCGTCTGCC ACGGCACCCG GCTCAAGCCC
GAGATCCTCG CCGTCAAGCT CAACGGCCGT TCGATCGCCG AGGTCACCGG CCTGTCCATC
GGCGACGCCT CCGGATGGCT GAACAGCCTG GAGCTCGGCG AGCGCGAGCG GGCCATCGCC
GACCGCGTGC TCCGGGAGAT CCAGGCCCGG CTGTCCTTCC TGGTCGACGT CGGCCTGGAC
TACCTGTCGC TGGACCGGCC GGCGGCGACG CTGGCCGGCG GCGAGGCGCA GCGGATCCGG
CTGGCCACCC AGATCGGGTC CGGACTGGTC GGCGTCCTGT ACGTGCTGGA CGAGCCCTCG
ATCGGGCTGC ACCAGCGGGA CAACACCCGG CTGATCGAGA CCCTCGTGCG GCTGCGCGAC
ATGGGCAACA CGCTGATCGT CGTCGAGCAC GACGAGGACA CCATCAAGAC CGCCGACTGG
GTCGTCGACA TCGGCCCCGG CGCCGGTGAG CACGGCGGCG AGGTCGTCGT CAGCGGCACC
GTCGAGGAGC TGCTGGCCAG CGAGCGCTCG CTGACCGGGC AGTACCTCTC CGGGCGCAAG
GAAATCGCCG TCCCGCAGGT GCGCCGCCAG CCGACGCCCG GCCGGGAGCT GGTCGTCAAG
GGCGCCCGCG AGCACAACCT CAAGGGCGTC GACGTCACCT TCCCGCTGGG CCTGCTCGTC
GCGGTCACCG GCGTCTCGGG CTCCGGGAAG TCCAGCCTGG TCAACGACAT CCTCTACACG
ACCCTGGCCA ACGAGCTGAA CCGCGCGCGG ATGGTGCCCG GCCGGCACCG CACCATCACC
GGCCTGGACC AGCTCGACAA GGTCGTGCAC GTCGACCAGT CGCCCATCGG CCGCACCCCG
CGGTCCAACC CGGCGACCTA CACCGGCGTC TGGGACCACG TGCGCAAGCT GTTCGCCAGC
ACGTCGGAGG CGAAGATCCG CGGCTACCAG CCCGGCCGGT TCTCCTTCAA CGTCAAGGGC
GGTCGCTGCG AGGCCTGCTC CGGCGACGGC ACGCTGAAGA TCGAGATGAA CTTCCTGCCG
GACGTCTACG TGCCGTGCGA GGTGTGCAAG GGCGCCCGGT TCAACCGGGA GACCCTCGAG
GTGCACTACA AGGGCCGGAC CGTCGCCGAG GTCCTGGACA TGCCCATCGA GGAGGCGGCC
GACTTCTTCG CCGCCATCCC GGCCATCTCC CGGTACCTGC GCACGCTGAC CGAGGTCGGG
CTGGGGTACG TCCGGCTCGG CCAGCCGGCG ACCACCCTCT CCGGCGGCGA GGCGCAGCGC
GTCAAGCTGG CCAGCGAGCT GCAGAAGCGG TCCAACGGCC GCAGCATCTA CGTGCTGGAC
GAGCCCACCA CCGGGCTGCA CTTCGAGGAC ATCCGCAAGC TGCTGATCGT GCTGCAGGGC
CTCGTCGACA AGGGCAACTC CGTCATCGTC ATCGAGCACA ACCTCGACGT CATCAAGAGC
GCCGACTGGC TGATCGACAT GGGCCCCGAG GGCGGCTTCC GCGGCGGTAC GGTCGTCGCG
GAGGGGCCGC CGGAGTTCCT CGCCACGGTC CCGGAGAGCC ACACCGGCCG CTACCTGGTC
CCGGTGCTCG CCCCGGACGC GGTCGCGGCC GCGGCGGCGC CGAAGAAGCG GGTCCGCAAG
AAGGCCAGCT GA
|
|---|
| Protein sequence | MDRLVVRGAR EHNLKDVNLD LPRDALIVFT GLSGSGKSSL AFDTIFAEGQ RRYVESLSAY
ARQFLGQMDK PDVDFIEGLS PAVSIDQKST NRNPRSTVGT ITEVYDYLRL LYARAGQPHC
PNCGKPISRQ TPQQIVDQVL AMEEGTRFQV LAPVVRARKG EYVDLFSSLQ TQGFSRVRVD
GVVHQLTDPP KLKKQEKHTI EVIVDRLTVK ESAKRRLTDS VETALGLAGG LVVLDFVDLP
EDDPQRERTF SEHLACVDDG LSFEALEPRS FSFNSPFGAC PECTGIGTRK EVDPDLVVPD
SEKSLAQGAI APWATSMSNE YFTRLLTGLS QQLGFSMDDP WGRLPARVQK AVLHGSPDQV
HVRYKNRYGR ERSYYAAFEG VLPFLERRHE DTDSEYMRDK YEGYMRDVPC PVCHGTRLKP
EILAVKLNGR SIAEVTGLSI GDASGWLNSL ELGERERAIA DRVLREIQAR LSFLVDVGLD
YLSLDRPAAT LAGGEAQRIR LATQIGSGLV GVLYVLDEPS IGLHQRDNTR LIETLVRLRD
MGNTLIVVEH DEDTIKTADW VVDIGPGAGE HGGEVVVSGT VEELLASERS LTGQYLSGRK
EIAVPQVRRQ PTPGRELVVK GAREHNLKGV DVTFPLGLLV AVTGVSGSGK SSLVNDILYT
TLANELNRAR MVPGRHRTIT GLDQLDKVVH VDQSPIGRTP RSNPATYTGV WDHVRKLFAS
TSEAKIRGYQ PGRFSFNVKG GRCEACSGDG TLKIEMNFLP DVYVPCEVCK GARFNRETLE
VHYKGRTVAE VLDMPIEEAA DFFAAIPAIS RYLRTLTEVG LGYVRLGQPA TTLSGGEAQR
VKLASELQKR SNGRSIYVLD EPTTGLHFED IRKLLIVLQG LVDKGNSVIV IEHNLDVIKS
ADWLIDMGPE GGFRGGTVVA EGPPEFLATV PESHTGRYLV PVLAPDAVAA AAAPKKRVRK
KAS
|
|---|
| |