Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_0746 |
Symbol | |
ID | 8752403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 778920 |
End bp | 780716 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | TIR protein |
Protein accession | YP_003407886 |
Protein GI | 284989332 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTGGCTGT TCGTCAGCTA CTCGCGCAAG GACGAGACTG CGGTTCAGGA GCTGGTCTCA GACCTCGAAC GGGCTCACCT GTCGGTGTGG CACGACCAGG AGCTCCGGGG TGGCGACCCC TGGTGGCAGG ACATCCTGCG CCGGATCCGT CAGTGCGACG TGTTCCTGTT CCTCCTATCC CACAGGTCCC TGGCCTCCAA GGTGTGCCTG GCCGAGTTGT CCTACGCACG AGCGCTGGGT CTGCCGATCG TGCCGGTGCA GGTCGGCCCC GTGGGCAACC TCCGGGTCAC CCCGGTCGCC GACATGAAGG TGGTCGACTA CCAGGAGCGG ACGCTGGCCC ACGCGGTGGA GCTGCTCAAC GCCATCCAGC AGGCCGCGAG CGAGCGAGGT CGGCTGCCCG AGCCCCTGCC GGAGCCACCC TCGGTCCCGT TCGAGTACCT GCTCCGGCTC GGGACGGCTA TCCGAGCGGA GCAGCTGACA CCCGACCAGC AGGGGGACTT CATCCGTCAA CTGCGCGAGG TCCTGGAGAC GGAGGACGAC GAAGGGGTCA GGGACGACGC CCGCGAGCTG TTGCGTGCCC TCCGCAGGAG ACAGGACATC ACTCACCGCA ACGCCCAGGC GGTCGACCGG CTGCTCGCCG ATTCGACGGC CCGCGAAACC CCTGTGCGGC TGTTCGTCAG CTACTCCCGG CAGGACGAGG TCGCGGTCCG GGACCTCGTC GTGTACCTGG ATCGGGCGAG CCTCTCGGTG TGGGCGGACC GGGACCTCCA GGGTGGAGAC CGGTGGTGGC AGGAAGTCCT GCAGCAGATC CGGGAGTGCG ACGTCTTCCT GTTTGTCCTG TCCGACCACT CCCTGGCCTC GAAGCCCTGT GTGGCCGAGC TGTCCTATGC GCGGGCCCTG GGCCTGCCGA TCCTCCCGGT GCTTATCGGC GACATAAAGG ATCTCCACCT CACACCTGTC GCCGATGTAC GGATCGCGGA CTACCGGCAC CGCACGCTGG CCGAAGGCAT GGCACTCCTC GACGCTATCC GGGACGCGGC GCAGGACCGC CGCCCGTTGC CCGACCCCCT GCCGAAGCCT CCCACGGTCC CGTTCGCGTA CCTGCTCCGC CTGGGCTCGG CGATCGGCGC GGCACATCTG ACGCTGGATC AGCAGGCGGA GTTCATCGGC CAGTTGCGCG AGGCCCTGGA GACCGAAGAC GACGAGAACC TCAGGGAGAC TGCACGCGAG TTTCTGCTAG CACTGAGAAG CAAACCCTAT CTGGCGCGCC GCAACTTTGA TGCGGTTGAC CGGCTGCTAG AAGAGCTCGA CGCCTCCGTA AGCTCGCCAA AATACGTAGG CGCACCCGCC CGGGACTACG GGAAAGCGTT CCTCTGTCAC TCATCCGGGG ATAAGGAGCG AGTTCGCGAC TTGTATCTCC GATTGAGGGG TGACGGAGTT CCATGTTGGT TCGACGAGGA GGAGTTGCTG CCCGGACAGG ACTGGGAGAG CGAAATCAGG AAGGCTATCC GCACCTGCCA GTATGTACTC GCCTGCCTGT CGCAGGCCTC AATCACCAAG ACGGGCTATG TGCAAAAGGA GCTCAAGTAC GCCCTGGATG TTGCCGACGA GCAGCCCCCA AACTCGATCT TCCTGATTCC AGTTCGCCTT GAGCCCTGCG AAGTACCCGA TCGACTCAAA AAGTTTCACT GGGCCGATCT CTATAACCCT AACGGCTATC AGCGGCTACT GAAATCACTG GCTTTCAACC AGGATACGTC CGTGGCTACG CCAAGCGGTG AGTGGTCGGT CCAATAG
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Protein sequence | MWLFVSYSRK DETAVQELVS DLERAHLSVW HDQELRGGDP WWQDILRRIR QCDVFLFLLS HRSLASKVCL AELSYARALG LPIVPVQVGP VGNLRVTPVA DMKVVDYQER TLAHAVELLN AIQQAASERG RLPEPLPEPP SVPFEYLLRL GTAIRAEQLT PDQQGDFIRQ LREVLETEDD EGVRDDAREL LRALRRRQDI THRNAQAVDR LLADSTARET PVRLFVSYSR QDEVAVRDLV VYLDRASLSV WADRDLQGGD RWWQEVLQQI RECDVFLFVL SDHSLASKPC VAELSYARAL GLPILPVLIG DIKDLHLTPV ADVRIADYRH RTLAEGMALL DAIRDAAQDR RPLPDPLPKP PTVPFAYLLR LGSAIGAAHL TLDQQAEFIG QLREALETED DENLRETARE FLLALRSKPY LARRNFDAVD RLLEELDASV SSPKYVGAPA RDYGKAFLCH SSGDKERVRD LYLRLRGDGV PCWFDEEELL PGQDWESEIR KAIRTCQYVL ACLSQASITK TGYVQKELKY ALDVADEQPP NSIFLIPVRL EPCEVPDRLK KFHWADLYNP NGYQRLLKSL AFNQDTSVAT PSGEWSVQ
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