| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0746 |
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| Symbol | |
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| ID | 8752403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geodermatophilus obscurus DSM 43160 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013757 |
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| Strand | - |
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| Start bp | 778920 |
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| End bp | 780716 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | TIR protein |
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| Protein accession | YP_003407886 |
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| Protein GI | 284989332 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGGCTGT TCGTCAGCTA CTCGCGCAAG GACGAGACTG CGGTTCAGGA GCTGGTCTCA
GACCTCGAAC GGGCTCACCT GTCGGTGTGG CACGACCAGG AGCTCCGGGG TGGCGACCCC
TGGTGGCAGG ACATCCTGCG CCGGATCCGT CAGTGCGACG TGTTCCTGTT CCTCCTATCC
CACAGGTCCC TGGCCTCCAA GGTGTGCCTG GCCGAGTTGT CCTACGCACG AGCGCTGGGT
CTGCCGATCG TGCCGGTGCA GGTCGGCCCC GTGGGCAACC TCCGGGTCAC CCCGGTCGCC
GACATGAAGG TGGTCGACTA CCAGGAGCGG ACGCTGGCCC ACGCGGTGGA GCTGCTCAAC
GCCATCCAGC AGGCCGCGAG CGAGCGAGGT CGGCTGCCCG AGCCCCTGCC GGAGCCACCC
TCGGTCCCGT TCGAGTACCT GCTCCGGCTC GGGACGGCTA TCCGAGCGGA GCAGCTGACA
CCCGACCAGC AGGGGGACTT CATCCGTCAA CTGCGCGAGG TCCTGGAGAC GGAGGACGAC
GAAGGGGTCA GGGACGACGC CCGCGAGCTG TTGCGTGCCC TCCGCAGGAG ACAGGACATC
ACTCACCGCA ACGCCCAGGC GGTCGACCGG CTGCTCGCCG ATTCGACGGC CCGCGAAACC
CCTGTGCGGC TGTTCGTCAG CTACTCCCGG CAGGACGAGG TCGCGGTCCG GGACCTCGTC
GTGTACCTGG ATCGGGCGAG CCTCTCGGTG TGGGCGGACC GGGACCTCCA GGGTGGAGAC
CGGTGGTGGC AGGAAGTCCT GCAGCAGATC CGGGAGTGCG ACGTCTTCCT GTTTGTCCTG
TCCGACCACT CCCTGGCCTC GAAGCCCTGT GTGGCCGAGC TGTCCTATGC GCGGGCCCTG
GGCCTGCCGA TCCTCCCGGT GCTTATCGGC GACATAAAGG ATCTCCACCT CACACCTGTC
GCCGATGTAC GGATCGCGGA CTACCGGCAC CGCACGCTGG CCGAAGGCAT GGCACTCCTC
GACGCTATCC GGGACGCGGC GCAGGACCGC CGCCCGTTGC CCGACCCCCT GCCGAAGCCT
CCCACGGTCC CGTTCGCGTA CCTGCTCCGC CTGGGCTCGG CGATCGGCGC GGCACATCTG
ACGCTGGATC AGCAGGCGGA GTTCATCGGC CAGTTGCGCG AGGCCCTGGA GACCGAAGAC
GACGAGAACC TCAGGGAGAC TGCACGCGAG TTTCTGCTAG CACTGAGAAG CAAACCCTAT
CTGGCGCGCC GCAACTTTGA TGCGGTTGAC CGGCTGCTAG AAGAGCTCGA CGCCTCCGTA
AGCTCGCCAA AATACGTAGG CGCACCCGCC CGGGACTACG GGAAAGCGTT CCTCTGTCAC
TCATCCGGGG ATAAGGAGCG AGTTCGCGAC TTGTATCTCC GATTGAGGGG TGACGGAGTT
CCATGTTGGT TCGACGAGGA GGAGTTGCTG CCCGGACAGG ACTGGGAGAG CGAAATCAGG
AAGGCTATCC GCACCTGCCA GTATGTACTC GCCTGCCTGT CGCAGGCCTC AATCACCAAG
ACGGGCTATG TGCAAAAGGA GCTCAAGTAC GCCCTGGATG TTGCCGACGA GCAGCCCCCA
AACTCGATCT TCCTGATTCC AGTTCGCCTT GAGCCCTGCG AAGTACCCGA TCGACTCAAA
AAGTTTCACT GGGCCGATCT CTATAACCCT AACGGCTATC AGCGGCTACT GAAATCACTG
GCTTTCAACC AGGATACGTC CGTGGCTACG CCAAGCGGTG AGTGGTCGGT CCAATAG
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| Protein sequence | MWLFVSYSRK DETAVQELVS DLERAHLSVW HDQELRGGDP WWQDILRRIR QCDVFLFLLS
HRSLASKVCL AELSYARALG LPIVPVQVGP VGNLRVTPVA DMKVVDYQER TLAHAVELLN
AIQQAASERG RLPEPLPEPP SVPFEYLLRL GTAIRAEQLT PDQQGDFIRQ LREVLETEDD
EGVRDDAREL LRALRRRQDI THRNAQAVDR LLADSTARET PVRLFVSYSR QDEVAVRDLV
VYLDRASLSV WADRDLQGGD RWWQEVLQQI RECDVFLFVL SDHSLASKPC VAELSYARAL
GLPILPVLIG DIKDLHLTPV ADVRIADYRH RTLAEGMALL DAIRDAAQDR RPLPDPLPKP
PTVPFAYLLR LGSAIGAAHL TLDQQAEFIG QLREALETED DENLRETARE FLLALRSKPY
LARRNFDAVD RLLEELDASV SSPKYVGAPA RDYGKAFLCH SSGDKERVRD LYLRLRGDGV
PCWFDEEELL PGQDWESEIR KAIRTCQYVL ACLSQASITK TGYVQKELKY ALDVADEQPP
NSIFLIPVRL EPCEVPDRLK KFHWADLYNP NGYQRLLKSL AFNQDTSVAT PSGEWSVQ
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