| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0601 |
|---|
| Symbol | |
|---|
| ID | 8752256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 638003 |
|---|
| End bp | 640549 |
|---|
| Gene Length | 2547 bp |
|---|
| Protein Length | 848 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_003407752 |
|---|
| Protein GI | 284989198 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.502776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCACGC TCCACCCGGT CCGGCCGGCT CCCCCTCCCG GCACGGACCC TCTTCCCCAG
GGTGGGTCGC CCTCCCCCGC CGGCACGCCG CCGCCCGGGG CCGACCTGCT GGCCGCCGTC
CTCTCCGGGA CACCGGAGGA GGAGCAGCCG GTCACCCACG TGCACCGGAT GCCGGTGCGG
GACAGCCGCA CCCTGCCGTG GCCCGCGTGG GTGAGCCCGG AGCTGCGCGG ACGGCTCGAG
GCCCAGGGGG TGCACGCGCC CTGGCGGCAC CAGGTCGAGG CCGCGCAGCT GGCCCGCGAC
GGCTCGCACG TCGTGGTGGC GACCGGGACG GCGTCGGGCA AGTCGCTGGC CTACCAGGTG
CCGGCGCTGA CCCGGCTGGC CGAGGACCCC CGCGCCTGCG TCCTGTACCT GGCGCCGACG
AAGGCCCTGG CCCGCGACCA GCTGGCCTCG GTCGCGGAGC TGGCCGACCC GTCGGTGCGG
CCGGCCGCCT ACGACGGCGA CACCCCCATG GAGGAGCGGG AGTGGGTCCG GCGGCACTCG
CGCTGGATCG TCACCAACCC GGACATGCTG CACCGCGGTG TGCTGCCGGC CCACCAGAAG
TGGTCGAGCA CGCTGCGCCG GCTGGCCTAC GTCGTCGTCG ACGAGTGCCA CGCCTACCGC
GGCGTCTTCG GCTCACACGT GGGTCACGTG CTGCGCCGAC TGCGGCGGAT CTGCCGCCGT
TACGGCGCCG AGCCGGTGTT CCTGCTGGCC TCGGCGACGG TGGCCGAGCC GGCCGCGGCG
GCGACCCGCC TCGTCGGCGC ACCGGTGGTC GCCGTGACCG AGGACGGCTC GCCGCGACCG
GGCGCGACGT TCGCGCTGTG GGAGCCGCCG CTGACCGAGC GCACCGGCGA GCACGGTGCT
CCGCTGCGCC GCTCGGCGGC CGCGGACGCC GCCACGCTCC TGGCCGACCT GGTGGAGCGC
GGCGCCCGCA CGCTGGCGTT CGTCCGGTCG CGGCGCAGTG CGGAGTCGGT GGCCGAGCAG
GCCCGGCACG TGCTGCGCGA CCGCGGCCGC GCCGACCTCG CCCGGCGGGT GGACTCCTAC
CGCGGCGGCT ACCTGCCCGA GGAGCGGCGC GAGCTGGAAC GCGCACTGTC GGCCGGCGAG
CTGCTCGGGG TGGCCACCAC GAACGCCCTG GAGCTGGGCA TCGACATCGC CGGCCTGGAC
GCCGTCGTGC TGGCCGGCTA CCCCGGGACG CTGGCCTCGC TGTGGCAGCA GGCCGGCCGG
GCGGGGCGGG CACAGCGCGA GTCGCTGGTC GTCTTCGTCG CCCGCGACGA CCCGCTGGAC
CACTACCTGG CCCACCACCC GCGCGCGGTC TTCGGCCGGC CGGTGGAGGC CACCGTCACC
GACCCCGGCA ACCCCTACGT GCTCGGACCG CAGCTGTGCT GCGCGGCCGC CGAGCTGCCC
CTGGTGCCCG AGGACCTGGC CGACTTCGGC GGCGCGGTAG CCGAGGCGCG GGTCGAGGAA
CTGGTCGCCG AGGGATCGCT GCGCCGCCGG CCCACCGGCT GGTACTGGGC CGGTCGCGGC
CGGCCGGACG TCGACATCCG GGGCAGCGGC CTGGCCCCGG TCACGATCAT CGAGGGCGAC
ACCGGGCGGC TGCTGGGCAC CGTGGACGGC GACGCCGCGC ACGCCACCGT GCACACCGGC
GCGGTCTACG TGCACCGCGG TGAGACCTAC GTCGTCGACG AGTTCTGCGT CGACGACGCC
GTCGCGGTCG TCCACCCGGA GAGCCCGGAG TGGACGACGG TGGCGCGGGA CGTCACCGAC
CTCGCGATCG TCGCCGTCGA CCGGTCGCGG TCGCTGGGCA CGGTCACCGC GCACACCGGC
GTCGTCGACG TGACCAACCA GGTGGTCGCC TACCAGCGGC GCCGGTTGGG GTCCGGCGAG
GTGCTGGCCG AGTTCCCGCT GGACCTGCCG CCCCGCCAGC TGCGCACCCG GGCGGTCTGG
CTGACGCTCG ACGAGCGGGC CGTGGCCCGG GCCAAGGTCG ACGACGCCGA GCTGCCCGGC
TCGCTGCACG CCGCCGAGCA CGCGGCGATC GGCCTGCTCC CCCTGCTGGC CACCTGCGAC
CGGTGGGACC TCGGCGGGGT CTCGACCGCT CTGCACCCCG ACACCGGGGC GGCCACGGTC
GTCGTCTACG ACGGGCACCC CGGCGGCGCG GGCTTCGCCG AGCGCGGGTT CGCCGTGCTG
CGGCGCTGGC TGCAGGCGAC CCGGGCGACG GTGGCCAGCT GCGAGTGCGA GAGCGGCTGC
CCGTCCTGCG TGCAGTCGCC GAAGTGCGGC AACGGCAACG AGCCGCTGGA CAAGGCCGGC
GCGGTGCGGG TGCTCGACGT CGTCCTCGAC GAGCTGGCCA CCGCCGAGGC GGCCGACGAG
GCGGTTCCCG ACGGGACCCC CGACGAGGAC GACAGCGGGG ACGCCGACCG GCCATGTGCA
CCCACCGACG AGGTCACGCC GGGAACGACC CGAGTGGGTG GCCCGGACGC GGAGCCGCCC
ACTGTGGAGG GCGACCTCGT CTTCTGA
|
|---|
| Protein sequence | MTTLHPVRPA PPPGTDPLPQ GGSPSPAGTP PPGADLLAAV LSGTPEEEQP VTHVHRMPVR
DSRTLPWPAW VSPELRGRLE AQGVHAPWRH QVEAAQLARD GSHVVVATGT ASGKSLAYQV
PALTRLAEDP RACVLYLAPT KALARDQLAS VAELADPSVR PAAYDGDTPM EEREWVRRHS
RWIVTNPDML HRGVLPAHQK WSSTLRRLAY VVVDECHAYR GVFGSHVGHV LRRLRRICRR
YGAEPVFLLA SATVAEPAAA ATRLVGAPVV AVTEDGSPRP GATFALWEPP LTERTGEHGA
PLRRSAAADA ATLLADLVER GARTLAFVRS RRSAESVAEQ ARHVLRDRGR ADLARRVDSY
RGGYLPEERR ELERALSAGE LLGVATTNAL ELGIDIAGLD AVVLAGYPGT LASLWQQAGR
AGRAQRESLV VFVARDDPLD HYLAHHPRAV FGRPVEATVT DPGNPYVLGP QLCCAAAELP
LVPEDLADFG GAVAEARVEE LVAEGSLRRR PTGWYWAGRG RPDVDIRGSG LAPVTIIEGD
TGRLLGTVDG DAAHATVHTG AVYVHRGETY VVDEFCVDDA VAVVHPESPE WTTVARDVTD
LAIVAVDRSR SLGTVTAHTG VVDVTNQVVA YQRRRLGSGE VLAEFPLDLP PRQLRTRAVW
LTLDERAVAR AKVDDAELPG SLHAAEHAAI GLLPLLATCD RWDLGGVSTA LHPDTGAATV
VVYDGHPGGA GFAERGFAVL RRWLQATRAT VASCECESGC PSCVQSPKCG NGNEPLDKAG
AVRVLDVVLD ELATAEAADE AVPDGTPDED DSGDADRPCA PTDEVTPGTT RVGGPDAEPP
TVEGDLVF
|
|---|
| |