Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_0007 |
Symbol | |
ID | 8751650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 7886 |
End bp | 9652 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003407190 |
Protein GI | 284988636 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCACCT CCGCGGAGAC CGCGGCTCGC GCGACCCTGC GGCAGCTGTG GCCCCTGGTC CGGCCGCACC GCCGCCCGCT GACCGCGGCC GCCGTCCTCT CGCTGGTCGC GGCCGCCGGC GCGCTGGCCC AGCCGGCGCT GGTCGCCCGG GTCATCGAGG CCGTCGGTGC CGGCCGGGCG CTGCTGCCCG TCGTCGGCCT GCTCGTCGTC GTCCTGCTGG CGTCCTCGGC GCTGGGTGCG GTGCAGGACT ACCTGCTGCA GCGCACCGCC GAGGGCGTCG TCCTCTCCAC CCGGCGGACG CTGGCCGACC GGCTCCTCCG GCTCCCGGTC GCCGAGTACG ACCGGCGGCG CACCGGCGAC CTCATGTCGC GGGTCGGTGC GGACACCACC CTGCTGCGGG CCACGGTGAC CTCCGGGGTC GTCGAGGTCG CCGGGTCGGC GGTGGTCGCG GTGGGCGCGG TCGTGGCGAT GGCGCTGGTC GACGGGTGGC TGCTGCTGGT CACCGTGGGC TCGGTCGCCG TCGGCCTCGC GGTGGTCGTC TCGGTCGCCC GTGGCGTGCA GCGGCTCTCC CGGCAGGCGC AGGAGGAGGT CGGCGCGATG ACCGCCGCGG TGGAACGGGC GCTGTCGGCC GTGCGCACCA TCCGGGCCAG TGGCGCGACG GCGCGGGAGG TGGACGTCGT CGCGGCCAGC GCCGGCCGGG CGTACGAGGC CGGGGTGCGG GTGGCCCGGC TGCAGGCATT GGTCAGCCCC GCGGGGTCGG TCGCCGTCCA GGGGGCCTTC CTGGCCGTCC TGGGGCTGGG CGGCTACCGG GTGGCGTCCG GCTCGATCGC CGTCGCCGAC CTGGTCGCGT TCATCCTCTA CCTGTTCCTG CTGGTCATGC CGCTGGGCCG GGCGATCGGG GCGTGGACCC AGCTGCAGAG CGGGCTGGGC GCGCTGGCGC GGGTGCAGGA GGTGCTCGCG CTCGAGCCGG AGGACGACGC GAGGCCCGAG CGGGGTGGAG CGGTCGTCGC CGTCCCCGCG TCGTCGCCGT CCGCCGAGGT CCCGCTGCTG GAGCTGGACG ACGTCTCGTT CCGCTACCCG AACGGCACCG ACGTGCTGCA CGGGGTCTCG TTGAGCGTGC CGGCCGGCAA CCGGGTGGCG CTGGTCGGGC CGTCGGGGGC GGGCAAGTCG ACCGTGCTGG CGCTGGTCGA GGGCTTCTAC CCGCTGACCG GCGGGGCGGT GCGGTGGGCC GGCGCCGACG TCCGGGACCT GCCGCGGGCC GGCCTGCGCG CCCGGCTGGG CTACGTCGAG CAGGAGGCGC CGGTGCTCGC CGGGTCGGTG CGCGACAACC TGCTGCTGGC CGCGCCGCAG GCCACTGACC CGGAGCTGTG GGCGGTGCTG GCCGACGTCG GGCTGACCGA CGTGGTGCAG CGCTCGCCGC GCGGCCTCGA CGTCCCGGTG GGGGACGACG GCGTCCTGCT GTCCGGGGGC GAGCGCCAGC GGCTGGCGAT CGCCCGGTCC CTGCTGGCCC GCCCGGCGCT GCTGCTGCTC GACGAGCCGA CCGCCAGCCT CGACGCCCGC AACGAGGCGC TGCTGCGCGA GACCCTGGCC GCCGCGGCCG CCGACCGAGC GCTACTGGTG GTGGCACACC GGCTGTCCAC CGTGCTCGAC AGCGACCGGA TCGTGGTGCT CGACGCCGGC CGGGTGGTCG CCGCCGGCAC CCACGAGGAG CTGGTGGAGA CCAGCCCCCT CTACCGCGAA CTCGCCGCCG CCCAACTGCT CGTGTGA
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Protein sequence | MSTSAETAAR ATLRQLWPLV RPHRRPLTAA AVLSLVAAAG ALAQPALVAR VIEAVGAGRA LLPVVGLLVV VLLASSALGA VQDYLLQRTA EGVVLSTRRT LADRLLRLPV AEYDRRRTGD LMSRVGADTT LLRATVTSGV VEVAGSAVVA VGAVVAMALV DGWLLLVTVG SVAVGLAVVV SVARGVQRLS RQAQEEVGAM TAAVERALSA VRTIRASGAT AREVDVVAAS AGRAYEAGVR VARLQALVSP AGSVAVQGAF LAVLGLGGYR VASGSIAVAD LVAFILYLFL LVMPLGRAIG AWTQLQSGLG ALARVQEVLA LEPEDDARPE RGGAVVAVPA SSPSAEVPLL ELDDVSFRYP NGTDVLHGVS LSVPAGNRVA LVGPSGAGKS TVLALVEGFY PLTGGAVRWA GADVRDLPRA GLRARLGYVE QEAPVLAGSV RDNLLLAAPQ ATDPELWAVL ADVGLTDVVQ RSPRGLDVPV GDDGVLLSGG ERQRLAIARS LLARPALLLL DEPTASLDAR NEALLRETLA AAAADRALLV VAHRLSTVLD SDRIVVLDAG RVVAAGTHEE LVETSPLYRE LAAAQLLV
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