| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4750 |
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| Symbol | |
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| ID | 8745341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013745 |
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| Strand | - |
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| Start bp | 358326 |
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| End bp | 359954 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 646515249 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_003406196 |
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| Protein GI | 284172814 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.216648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAACT CTGATCCAGA CGGTCGCTTC GCTCGGTTCG CGAACGAGCT CGACGCTCCC
GTGTTTCTCG TCGGGTTCCT CACAGCGCTG GTAGCAGTCA TCGCCTTCGC TCTGATGCCG
GACGCCGCCG CCAGCGCCGT CAAGCGTGTG AACTCGTTGG TGGAGGAAAA AGTCGGCTGG
ATGTACCTCC TCGCGATGTT CTTCATCGTG GCGTTCGCGC TGTTCCTGGT GTTCGGTCCG
TGGGGGAACG TCAAGCTCGG CAAGCCGGAC GAGGAGCCAC AGTACAGCTT CTTGTCGTAC
TTCGCGATGC TGTACTCGGC CGGGATCGGC GCAGGGATCG TGTTCTGGGG CCCAGCGGAG
GCGATCTTTC ACTACGACAC GGTTCCGCCG CTCGTCGGCG CCGAGTCGCA GACGGCCGAC
GCAGCGGTCG GTGCTGTCCG GTACACGTTC TTCCACTGGG GGCTTTCTGC GTGGGCCGCG
TACGCTATCA TGTCGCTTCC CATAGCGTTC TACACGTACC GGCACGACGC GCCCATGCGC
GTCTCGACGG TGCTCACTCC ATTCTTGGGC ATCGACAACC TGGACAGCGT CTGGGCGAAA
CTGGTCGACA TCCTCGCGGT GTTCGCCACC CTCGGCGGTA TCGCGACGAC GCTCGGGTTC
GTCGGGAGTC AGTTCCTGAC CGGTATCGAG TACACTACCG GGGTATCGGT CGGTGACACC
GGAACGATTC TGGCGATTGT CGGCCTGACG ATCGCGTTTA CGCTGTCAGT GACGGTGGGT
ATCGAGAAGG GAGTCCGTCG GGTGTCCCGG TTCAATATGG GGCTATTCGT GGTAGTCATG
CTTCTGACGT TCGTGCTGGG CCCGTCAGCG TACATCATGT CGGTCACGAC GGAAGCGCTC
GGACAGTATA TCAATCAGTT CGTCGCGATG AGTTTCTTCA TGAACGCGGG CAACGATGCG
AGCTGGGTCG GTAACTGGAC CATCTTCTAC TGGGCCTGGT GGTTCTCCTG GACGCCGTTC
GTTGGGCTGT TCATCGCCCG CGTTTCGCGG GGCCGTACGA TCCGTCAGGT AGTCGTCACC
GGCGTCTTGG CGTCGACGGC GGTGACGATC CCTTGGTTCG GGATCATGGG TAGCATCGCG
ATCACGGAAC AGTCGACCAA CGCGGCGGAT ATCCTGGGGG TCATCTCCGA GTATGGCGTC
GCCGGCTCCG GGTACCCACT GTTCGAAGCA TTACCCGCCG GCGACGTACT GAACCTCCTT
TTCCTGCTGC TGATCACGAC GTTCTTCGTC ACGTCGGCGG ACTCCTCGAC GCTGGCGCTG
GGAATGCTCA CCACCGGCGG CGAACTCGAG CCGTCCACGA TCAACCGCGT GATCTGGGGC
GCCCTGGTCG GGGCACTGGC GTCCCTGCTG ATGGTCGTCG GCGGCGTCGA CGCGCTCCAA
GCGGCGTCGA TTATCACCGG CGGTCCCTTC GCCGTCATCA CCATCCTCGC GGTGCTGGCG
ATCAGCTATC CCTGTCACGA TATCCACCCG GTGTTCTTCG ACACTGATCG TTCGGATTCC
GCGTCGAATC AGTCCGCGAG ACTCGACGCT TCAGGGGAGA CAGCAGCTCG AGAGTCGGAT
GATGATTGA
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| Protein sequence | MGNSDPDGRF ARFANELDAP VFLVGFLTAL VAVIAFALMP DAAASAVKRV NSLVEEKVGW
MYLLAMFFIV AFALFLVFGP WGNVKLGKPD EEPQYSFLSY FAMLYSAGIG AGIVFWGPAE
AIFHYDTVPP LVGAESQTAD AAVGAVRYTF FHWGLSAWAA YAIMSLPIAF YTYRHDAPMR
VSTVLTPFLG IDNLDSVWAK LVDILAVFAT LGGIATTLGF VGSQFLTGIE YTTGVSVGDT
GTILAIVGLT IAFTLSVTVG IEKGVRRVSR FNMGLFVVVM LLTFVLGPSA YIMSVTTEAL
GQYINQFVAM SFFMNAGNDA SWVGNWTIFY WAWWFSWTPF VGLFIARVSR GRTIRQVVVT
GVLASTAVTI PWFGIMGSIA ITEQSTNAAD ILGVISEYGV AGSGYPLFEA LPAGDVLNLL
FLLLITTFFV TSADSSTLAL GMLTTGGELE PSTINRVIWG ALVGALASLL MVVGGVDALQ
AASIITGGPF AVITILAVLA ISYPCHDIHP VFFDTDRSDS ASNQSARLDA SGETAARESD
DD
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