| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4679 |
|---|
| Symbol | |
|---|
| ID | 8745411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013745 |
|---|
| Strand | - |
|---|
| Start bp | 266329 |
|---|
| End bp | 267336 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646515185 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_003406132 |
|---|
| Protein GI | 284172750 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAGA TGGAAGACGC GTTGCTGTTC AGCGCGCTCG CGTTCGTCTG GGGAACAGCC
TTCACAGCGA TCGAAATTGG GCTAGAAACC CTGCCACCGC TTCTGTTCGC GGCGGCCCGA
TTAGACATCG CTGCGCTCAT CTTCGCTGGA GTCGTGCTAC TCAGTCGAAA CCAGTGGCTA
CCCCGGACTA GAGCGGACAT GGCTCTCATC CTCTCGAACG GCATCCTCGT CATCGGAGCG
CAATTCGCGT TCGCCTTCAT CGGCCAGAGC TACGTTACCA GCGGTGTCGC CGCGATCATC
ATCAGTTTCA CACCGATCAT CACTCCGATT ATCGCCATCC GTCTCCTCCC GACGGAACGC
ATCTACGTCA CGGACGTCAT CGGTCTGTGT GCCGGGCTCG CCGGCGTAAT CGCGATCGCA
ATCGCCGGTG GGTCCTTCGA CGGACAACTC CTCGGTGTCG GACTGCTGTT GGCGGCCGCA
GTCGTCTTCG CGCTCGGCTC CGTGCTGACG GAACGTTGGA CGGCCGCTCT CCCGACGATG
TCCCTCTACG CGTGGTCGAT GGGCACCGGC GCGATATTCC TGCACGTCAC AGCCTACGCC
TATTCGGGCG CATCGTTCCG AGACGTGGCG TGGACGCCAT CAGCGGCCGC CGCACTCGTC
TATCTCGGCA TCTTCGCTAC GGCGGGAGGG TTCCTCCTCT ACTTCACCTT ACTGAATCGA
ATCGGTGCGA CGAGCGTCAG TCTGATCAAC TACGCGTCAC CCGTTGTGGC GGCGATTTTC
GGTGCAGCAC TCCTCGGTGA GCAAATTACC GTGGCGACCG TTGTCGGATT CGCGCTCATC
GTCGTCGGAT TCGCGCTTTG CAATATCCGA CCGCTCTGGC GGCTTCTCCG GTCTACCTGG
AACGCGGACG TCGATAGTCG ATCGCTCGAA CGCGATGAAG TCTGCGTCCG AGGCAATCTG
TACAAGAAAA CGGATGACTC ACAAAACTAC CAACAGCCGA GTGACTAA
|
|---|
| Protein sequence | MRKMEDALLF SALAFVWGTA FTAIEIGLET LPPLLFAAAR LDIAALIFAG VVLLSRNQWL
PRTRADMALI LSNGILVIGA QFAFAFIGQS YVTSGVAAII ISFTPIITPI IAIRLLPTER
IYVTDVIGLC AGLAGVIAIA IAGGSFDGQL LGVGLLLAAA VVFALGSVLT ERWTAALPTM
SLYAWSMGTG AIFLHVTAYA YSGASFRDVA WTPSAAAALV YLGIFATAGG FLLYFTLLNR
IGATSVSLIN YASPVVAAIF GAALLGEQIT VATVVGFALI VVGFALCNIR PLWRLLRSTW
NADVDSRSLE RDEVCVRGNL YKKTDDSQNY QQPSD
|
|---|
| |