Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4316 |
Symbol | |
ID | 8744944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013744 |
Strand | - |
Start bp | 578892 |
End bp | 580085 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 646514859 |
Product | beta-lactamase domain protein |
Protein accession | YP_003405806 |
Protein GI | 284167528 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.558515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACGATA TGGACCTTCC AATGCCGGAC GTCGAAGTCG AATCGGTCAG CCCCGACGGG CTGAAGGAGC GGATCGACGC GGGCGAAGCA GTCACGCTCC TCGACACTCG TATGGAGTCA GAGTACGACG AGTGGCGAAT CGAGGGCGAG AACGTCGAGT CGATCAACGT TCCGTACTTC GAGTTCCTGG ACGACGAGAT CGACGACGAT GTCCTTGCTC AGATTCCCAA CGACCGCGAA ATTACGGTTC TCTGTGCGAA GGGCGGCTCG AGCGAGTACG TCGCCGGGAC GCTGAAAGAA CGCGGCTACG ACGTGGACCA CCTCGAGGAC GGGATGAACG GCTGGGCGCG CATCTACGAG CGCGTCGAAG TCGACCGCTA CGACGGCGCG GGGACGCTCT ACCAGTACCA GCGTCCCTCG AGCGGCTGTC TCGGCTACTT CCTCATCGAC GGCGACGAGG CGGCCGTGAT CGACCCGCTG CGCGCGTTCA CGAGTCGGTA CCTCGAAGAC GCGGACGATC TGGGGGTCGA TCTACAGTAC GCGATCGACA CGCACATCCA CGCGGACCAC ATCTCGGGCG TCCGTTCGCT CGACGCGGTC GGCGTCGAAG GCGTCATCCC CGAGGCGGCG GTCGACCGCG GCGTCACCTA CGCCGACGAG ATGACGCTGG CCGCGGACGG CGACGAGTTC CAGGTCGGTT CGGCGACGAT CGAGACCGTC TACACGCCCG GTCACACCTC CGGGATGACC TCGTATCTGA TCGACGACTC GCTGCTCGCG ACCGGCGACG GGCTGTTCGT CGAGAGCGTC GCCCGCCCCG ACTTAGAGGA GGGCGACGAG GGCGCGGAAG ACGCTGCAAA GCAGCTCTAC GAGTCGCTGC AGGAGCGCGT GCTGACCCTA CCCGACGACA CGCTGATCGG CGGCGCACAC TTCAGCGACG CGGCCGAACC CGCCGACGAC GGCACGTACA CGGCACCGGT CGGCCAGCTC ACGGCGGAGA TGGACGCCCT GACGATGGAC GAAGACGAGT TCGTCGAATT GATCCTCTCG GACATGCCGC CGCGGCCGGC CAACTACGAG GACATCATCC CGACGAACCT CGGTCAGCAG GAGGCTGACG ACGAGGAGGC GTTCGAACTC GAGCTCGGTC CAAACAACTG TGCGGCCAGC CAGGAGTCGC TGGCGGATGA CTGA
|
Protein sequence | MDDMDLPMPD VEVESVSPDG LKERIDAGEA VTLLDTRMES EYDEWRIEGE NVESINVPYF EFLDDEIDDD VLAQIPNDRE ITVLCAKGGS SEYVAGTLKE RGYDVDHLED GMNGWARIYE RVEVDRYDGA GTLYQYQRPS SGCLGYFLID GDEAAVIDPL RAFTSRYLED ADDLGVDLQY AIDTHIHADH ISGVRSLDAV GVEGVIPEAA VDRGVTYADE MTLAADGDEF QVGSATIETV YTPGHTSGMT SYLIDDSLLA TGDGLFVESV ARPDLEEGDE GAEDAAKQLY ESLQERVLTL PDDTLIGGAH FSDAAEPADD GTYTAPVGQL TAEMDALTMD EDEFVELILS DMPPRPANYE DIIPTNLGQQ EADDEEAFEL ELGPNNCAAS QESLADD
|
| |