| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4214 |
|---|
| Symbol | |
|---|
| ID | 8744842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | + |
|---|
| Start bp | 485956 |
|---|
| End bp | 487200 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646514760 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003405707 |
|---|
| Protein GI | 284167429 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACGG ACTACTCGGA GTCTATCCGC TGGCCGATGT TGATAACGCT GGTGCTGATC
GGCTTTATCC CGGCTTTCTC GGGGGCACTG ATCAACCCGA CCATCCCGGC GATCCAGGAG
ACATTCTCGC ACGAGCCGTA CTCGGAGACG TTGGCACAGC TCGTCAGTTC GATGTCGGCC
TGGATCGTGA TCGTCGTCGC ACCCCTCACG GGATACGTGC TGGACAAGTA CGCGCGCAAG
CCGATCCTGA TCGGGGCGGT CATCGTCTAC GGGGCCGGGA CGAGCATCGC GTTCTTCCTC
GACTCGATCT ACCTGATCCT GGCGACCCGC GTGCTCGACG GCATCGCCGT CGGCGCGCTC
ATGGTGACGG TGCCGACGCT CATCGCGGAC TACTACTCGG GCGGCCGCCG CGAGTCCATC
ATGGGCTACT ACAGCGCCGT GACGGCCGCC GGCGGCGCCA TCGCCGCGGT CATGGGCGGC
TACATCGCGG GGACCCTCGG TTGGCGGTAC ATCTTCCTCG TCTTCGCGGG GGCGCTCCTG
TTCGTCCCGC CGATCCTCCG GTTCCTGCCG GAACCCGACG TGGAGGAGTC GGCTAGGGAC
GACGGCGTCG GCCGCCTCGA GGCGATCAAG AAACTCCTGC GTGAGTCGCC CGTAAAGCTG
GTCGCCGGCA TCTACGCCAT CGTGTTGGTG GGAATGCTGG TGAACAACCT CGTCATGATC
GAGGTGCCGT ACTATCTCCA GAGCTCCCTC ACCGTGACCG ATTCGCAGAC CGGCCTCGTG
ATCTCGGGTG TGATGATCGG CAGCTTCGTC TCCGCCTCGA TGTACGGTCG GATCAAACAG
CGCATGCGTC ACGTCACGGT GATGGCGCTC GGTTTCGTCA TCGCAGCGAT GGGATTCCTC
CTGTTTACCG CCGCTGATAC CCTCCCGGTC GTGATCGCCG GCGTCATCGT CAGCGGGGCG
ACGGGATTCG GCATCATCCA GCCCACGGCG AACGATTGGG TCGCGTCGGT CGTCCCGGGA
GAGGTCCGCG GTCGCGCCCT CAGCGGCGTG ACGATGATGA TGTACGGTGG GTTCGCGCTC
TCGCCGTTCG CCCCGATACC GCTGGTCGAC GCGTTCGGTC GTAGGGGGAT GCTGCAGACC
GCCGGCTACG TCATGCTCAT CGTCGGGGGC GCCCTCCTAA CGGTCTGGTT CGTCAGTCGA
TCTACCGTCG ACTCGACAGC GAAGGTGTCA TCCTCTGACG ACTGA
|
|---|
| Protein sequence | MSTDYSESIR WPMLITLVLI GFIPAFSGAL INPTIPAIQE TFSHEPYSET LAQLVSSMSA
WIVIVVAPLT GYVLDKYARK PILIGAVIVY GAGTSIAFFL DSIYLILATR VLDGIAVGAL
MVTVPTLIAD YYSGGRRESI MGYYSAVTAA GGAIAAVMGG YIAGTLGWRY IFLVFAGALL
FVPPILRFLP EPDVEESARD DGVGRLEAIK KLLRESPVKL VAGIYAIVLV GMLVNNLVMI
EVPYYLQSSL TVTDSQTGLV ISGVMIGSFV SASMYGRIKQ RMRHVTVMAL GFVIAAMGFL
LFTAADTLPV VIAGVIVSGA TGFGIIQPTA NDWVASVVPG EVRGRALSGV TMMMYGGFAL
SPFAPIPLVD AFGRRGMLQT AGYVMLIVGG ALLTVWFVSR STVDSTAKVS SSDD
|
|---|
| |