| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4210 |
|---|
| Symbol | |
|---|
| ID | 8744838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | + |
|---|
| Start bp | 482089 |
|---|
| End bp | 483048 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646514757 |
|---|
| Product | dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_003405704 |
|---|
| Protein GI | 284167426 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTAG CGACTGCAGA AGTCAAGGAG CGGCTACGAG GAGTCGCCGT CGGTATCCTC
ACGCCGTTCG ATCAGGACGG CGAAATAGAG CACTGGAAGA TCGAAGAGAA CGCACAGTCA
CTCTACGACG AGGGTATCAG AACGTTCCTC GCAGCTGCGA ACATCAGCGA ATACCACTCG
TTGGCCGATC AAGAACGGAT CGACGTCACC GAGGCGGCCG TAACCTCGCT TCCGTCGGAC
GCGTGTGTCC TCGCCGGCGT CGGCGGGAGC ACGAACCAGG CACAGGACTT GATTCGGGCG
TACGATCAAA TCGGCGTCGA CGCGATGATG GTGATGCCGC CCGACCACAC GTATCTCCAC
GAGCAGGGAT TACTGGAGTA CTACCGGTCG CTGGCTGACG CAACGGAAAC CCCGCTCGTC
CCGTACGTTC GCGGCTTCGA TCCGTCCGTC GAGTACCTCG CGCAACTGAC GAAACTGGAC
GGCGTCGTCG GGATCAAATA CGCGCTGACG GATTCGGTGA AACTCGGGGC CGGAATCAGC
GCCGGTGCGG ACGACGTCGT CTGGGTGAAC GGCCTGGCAG AACCGTACGC AGTTTCGTAC
TGGGCCGAAG GCGTCGAGGG CTTCTCGGCG GGCGTCAGCA ACTTCCGCCC GGAGATCGGT
CTCGAACTGT ACGATGCGCT GGCGAACGAA AACTGGAGCC GCGCCCGCGA ACTGCGCGAT
GTCAGTCTCC CGTATCAGAG CTTCCGAGAG AAAACCGGAC AGAACAACAC GATCGCCGGT
GGTGTAAGCG TCCCAGCCGT CAAGAAGGGG CTCGAACTTG CCGGCCTATA CGGCGGTGAT
GTCCGGGAAC CGATCCGCTC GCTGACGCCG CAAGAGGAGA AGCGCGCCGA AGAACTGTAC
GATCAACTGA ACGACAAACT CGAACAGCTA CTCTCCAATG ACACCGTTGA AAAAGCTTAA
|
|---|
| Protein sequence | MSLATAEVKE RLRGVAVGIL TPFDQDGEIE HWKIEENAQS LYDEGIRTFL AAANISEYHS
LADQERIDVT EAAVTSLPSD ACVLAGVGGS TNQAQDLIRA YDQIGVDAMM VMPPDHTYLH
EQGLLEYYRS LADATETPLV PYVRGFDPSV EYLAQLTKLD GVVGIKYALT DSVKLGAGIS
AGADDVVWVN GLAEPYAVSY WAEGVEGFSA GVSNFRPEIG LELYDALANE NWSRARELRD
VSLPYQSFRE KTGQNNTIAG GVSVPAVKKG LELAGLYGGD VREPIRSLTP QEEKRAEELY
DQLNDKLEQL LSNDTVEKA
|
|---|
| |