Gene Htur_4102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_4102 
Symbol 
ID8744730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand
Start bp364451 
End bp365884 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content60% 
IMG OID646514660 
Productsugar transporter 
Protein accessionYP_003405607 
Protein GI284167329 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACAT CACACACAGA TACTGCCGAC GGACAGAACT CGTTTATTTA CGTAGTCGCG 
GCGTTAGCCG CACTGAACGG CTTACTATTC GGCTTCGACA CCGGCGTTAT CTCCGGTGCA
ATGCTCTACA TTCGGGATGC GTTCGAACTC ACCGCAGTGT TCGGCTATAC GATGAATCCG
TCCTACGTCG AAGGGGTGAT CGTCAGTGGA GCAATGGTCG GCGCAATCAT CGGCGCAGCG
CTCGGCGGTC GTCTCGCCGA CCGGCTCGGT CGACGCCGAC TCATCCTCGT CAGCGCAGTC
GTCTTCTTCG TCGGCTCGCT CATCATGGCG ATCGCACCGA CCGTCGAAAT ACTAATCGTC
GGCCGCATCC TTGACGGGGT CGGGATCGGC TTCGCGTCGG TAGTCGGTCC ACTCTACATC
TCCGAAATCT CGCCCCCGAA GATACGGGGA TCGCTGGTCT CGCTGAACCA GTTAACCATT
ACAAGCGGTA TCCTCATCGC GTATCTGGTG AATCTCGCGT TCGCCGGCGG TGGTGAATGG
CGCTGGATGC TCGGTCTCGG AATGGTCCCT GCAGCCGTCC TATTCGTCGG GATGCTCTTC
ATGCCGGAAA GTCCGCGCTG GCTCTACGAA CAGGGCCGTG AGACGGATGC CCGCGAGGTC
CTGTCCCGAA CCCGCGCCGA AAGCCAGGTC GGTACCGAAC TCAGCGAAAT CAAAGAAACG
GTCCAGGTCG AGTCCAGTTC GTTTCGTGAT CTGTTCCAGC CGTGGGTCCG CCCGATGCTG
ATCGTCGGCG TCGGACTGGC GGTATTCCAG CAAGTGACCG GCATCAACAC GGTCATCTAC
TACGCTCCGA CGATCCTCGA GTCCACTGGC TTCGAAGACA CCGCTTCGAT TCTCGCGACT
GCCGGAATCG GCGTTGTCAA CGTCGTGATG ACCATTGTTG CCGTCCTCCT CATCGACCGG
GTTGGGCGCC GACCGCTGTT GCTGAGCGGA CTCAGCGGAA TGACCTTGAT GCTCGCCGCC
CTCGGCTTCA CGTTCTTCCT ACCCGGCCTC TCGGGCATCA TCGGCTGGGT CGCGACCGGG
AGCCTGATGC TGTACGTCGC GTTCTTCGCA ATCGGACTCG GACCGGCGTT CTGGCTGCTG
ATCTCCGAGA TCTATCCGAT GCAGGTCCGT GGAACCGCAA TGGGGACCGT TACGGTCCTC
AACTGGGCTG CGAACCTGAT CGTGTCGCTG ACGTTCCTCC GTCTAGTCGA CGTCTTCGGC
CAGTCGGGCA CGTTCTGGCT CTACGGCGGG CTCTGTTTCA TCGCACTGGT CTTCTGTTAC
CAGCTTGTCC CCGAAACGAA GGGCCGATCG CTCGAGGAGA TCGAATCCAA TCTGCGCGAG
ACCACCATCG GCAAGAAAGC CGGGCGCTCT AACACCGTGA AATCGGACGA CTAA
 
Protein sequence
MPTSHTDTAD GQNSFIYVVA ALAALNGLLF GFDTGVISGA MLYIRDAFEL TAVFGYTMNP 
SYVEGVIVSG AMVGAIIGAA LGGRLADRLG RRRLILVSAV VFFVGSLIMA IAPTVEILIV
GRILDGVGIG FASVVGPLYI SEISPPKIRG SLVSLNQLTI TSGILIAYLV NLAFAGGGEW
RWMLGLGMVP AAVLFVGMLF MPESPRWLYE QGRETDAREV LSRTRAESQV GTELSEIKET
VQVESSSFRD LFQPWVRPML IVGVGLAVFQ QVTGINTVIY YAPTILESTG FEDTASILAT
AGIGVVNVVM TIVAVLLIDR VGRRPLLLSG LSGMTLMLAA LGFTFFLPGL SGIIGWVATG
SLMLYVAFFA IGLGPAFWLL ISEIYPMQVR GTAMGTVTVL NWAANLIVSL TFLRLVDVFG
QSGTFWLYGG LCFIALVFCY QLVPETKGRS LEEIESNLRE TTIGKKAGRS NTVKSDD