Gene Htur_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3972 
Symbol 
ID8744600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand
Start bp231932 
End bp233089 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content57% 
IMG OID646514549 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_003405496 
Protein GI284167218 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGACTC GAGAACTTCC GGAAGCGGCT CCCGGCCACT ATCGCGAGTC TCATCCACAT 
CCATACTACA TTCCGGACAA GCTTCCCCTC TCAACAGGGA TCGATATCGA CGACGAACTC
ACGGACCGTA TCGCCGACGC GTCCTTTCAG CTCGGCCGGA TCGACGGGAT CAGTCCAACC
GTTGATTTCT CGCCAGTTCT CTACACGTCT CTCGTCCGCC TCGAGGCCGT CGAGACCGCC
GAAATAGAAG GGGCCGATGT CGACGTGGAT GAGGTATACG CCCATCACAC ACGGACCAGC
AGAGACGAGA CTGTCGACGT GAGTCGGGAC TTGCAGGAGG TCCTGAACGC CGAACGCGCC
CTTCAGAAAG GATTCGACGC GATCAAACAG GGCGAGCCGA TAACGCTCGA CCTCCTCCAG
TCGCTCCATG AGTTGCTCCT CGAAAACGTC CGGAACGAAG GTGAGGTCGT GGGAGATTGG
CGAACGACCG ATGTCCACCT TCCCTCTCCG TACGCCAGTC AGCCTCCGTT CGTTCCCCCG
CCGCACCAAT CGGTTCCCGA GCTGATGGAC TCCCTAGAGA CGTATATCCA GATGGGCGGC
CAATATCACC CGCTCGTCGA TCTCGCGATT ACGCATTACC AGTTTGAGAC GATTCATCCC
TGTGAGGACG GGAATGGCCG GCTCGGCCGC ATTCTCATCG TGTTACAGCT CTGCGCTGAG
GGATATCTGA GCGAGCCGTA TCTCTATCCG AGCGCCTACT TGAATCGCAA CAAGCAGGAA
TACGTCGAGA AGATGCGCGC TGTGAGCGAA ACTGGGGACT GGCATGACTG GATCACGTTC
TTTGTCGAAG GAATCGAGGT ACAGGCGCGG GACTCGTACG AGCGAACACA GCGGCTGATA
GAACTTCGAC GCGACTACGA GCAACGGTAT CCACACCAGA AAACGAGCCA TCGCCTTGCG
CGGGGCGTCT TCGACATGCC GTACTTCACT GCCAGCGATG TTCAAGATGA GTTCGATGTC
AGTCGACAAA CCGCGTATAA CGCCATCGAG GAGTTAGTAT TCGACGGTAT CCTCGTCGAG
ACGACTGGTA AACAGCGGAA TCAAGAGTAC AAAGCGATCG ATATCTTCGA CATCCTCGAG
AGACCGCCGG ATCACTAA
 
Protein sequence
MRTRELPEAA PGHYRESHPH PYYIPDKLPL STGIDIDDEL TDRIADASFQ LGRIDGISPT 
VDFSPVLYTS LVRLEAVETA EIEGADVDVD EVYAHHTRTS RDETVDVSRD LQEVLNAERA
LQKGFDAIKQ GEPITLDLLQ SLHELLLENV RNEGEVVGDW RTTDVHLPSP YASQPPFVPP
PHQSVPELMD SLETYIQMGG QYHPLVDLAI THYQFETIHP CEDGNGRLGR ILIVLQLCAE
GYLSEPYLYP SAYLNRNKQE YVEKMRAVSE TGDWHDWITF FVEGIEVQAR DSYERTQRLI
ELRRDYEQRY PHQKTSHRLA RGVFDMPYFT ASDVQDEFDV SRQTAYNAIE ELVFDGILVE
TTGKQRNQEY KAIDIFDILE RPPDH