| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3945 |
|---|
| Symbol | |
|---|
| ID | 8744573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | + |
|---|
| Start bp | 202942 |
|---|
| End bp | 203826 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646514526 |
|---|
| Product | phosphonate ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_003405473 |
|---|
| Protein GI | 284167195 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.351226 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG ACGCTCAACG GTACGCCGAG GTCGATCCGA GTGGCACTCG CACGCTGCTC
TCGAAGCGGT CGTTGTCGAG CGTCCTCGCG GTAACGGTCG TCCTGGCGGT CGCCAGCTGG
ATCGTCGGCG TCGATCCGTT ACTACTGCTA TCGTCGGCGG CGCGAGACCA GATGGTCGCG
TTCGTGGCCG ACGGGTTCCC GCCCGAGGTC GGCCGCGACT TTCTGTTCGG TCGAACGCTC
CGAGACGGAT TGCTGTGGGC GGTCGTCGAA ACCCTGGCCA TCAGTATCGT CGGCACCTCG
CTCGCCGTGG TCTTCGCGAT ACCGCTCGCC CTGGCGAGCG CGTCGACCGT GACGCACGAG
GGACCGCTGT ACGCCGGCGC GTCCTCTTCG CGAGTCGCAT TCGGGTACGT CCTGCACCGA
AGCGCTCGGG TGGTCTTGAG TTTCCTCCGG TCGGTTCCCG GCCTCGTCTG GGGGTTTCTC
TTCGTCACCG CGGTGGGACT GGGACCGTTC GCCGGCGCGC TCGCACTCGG CGTTCACAAC
GCGGGCGTAC TCGGTAAACT GTACGCGGAC TTCCTCGAGG ACACAGATCC GATGACGACG
GAAGCGGTCG CGTCGAGCGG GGCGACGCGG TTCCAGGCCG TGTGTCACGG CATGGTGCCA
CAGATCTCAG CGACGGTGGC GTCGTACACG CTCTACAGGT GGGAATGCAC GATCCGCTCG
GCGACGATCC TCGGCTTCGT CGGCGCCGGC GGTATCGGCT ACTATCTCGT CATCTCGATC
CAACGCCTAC AGTATCAGAA GCTCGTCACG GCGATCGCTG CGGTGTTCGC GCTCGTGGTG
ATGAGCGACG CGCTGGCGTC GAGGCTTCGG GCGAGGATGG TGTGA
|
|---|
| Protein sequence | MTEDAQRYAE VDPSGTRTLL SKRSLSSVLA VTVVLAVASW IVGVDPLLLL SSAARDQMVA
FVADGFPPEV GRDFLFGRTL RDGLLWAVVE TLAISIVGTS LAVVFAIPLA LASASTVTHE
GPLYAGASSS RVAFGYVLHR SARVVLSFLR SVPGLVWGFL FVTAVGLGPF AGALALGVHN
AGVLGKLYAD FLEDTDPMTT EAVASSGATR FQAVCHGMVP QISATVASYT LYRWECTIRS
ATILGFVGAG GIGYYLVISI QRLQYQKLVT AIAAVFALVV MSDALASRLR ARMV
|
|---|
| |