| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3849 |
|---|
| Symbol | |
|---|
| ID | 8744477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | - |
|---|
| Start bp | 76767 |
|---|
| End bp | 77711 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646514434 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003405381 |
|---|
| Protein GI | 284167103 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0687851 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGCG ACGATTCCCG CTCGCGTTCT GACGCGACGG AGGACGGGCG TCCATCCGCC
GGGAATGATC GCGACTCGAA CCTGACGGAC GCCGCGAGTG AGGCCGCCGA GCGCTCCTCG
CCCATCGACG ATTCGGTCGT GCTGATCACT GGAAGTTTGT CCGGCATCGG CCACGCGACG
GCCCGCGCGT TCCGCGCTCG AGGCTGGCGC GTCTGGGCGA CGTCTCGGGA TCCGGCCGAC
GTGGCCGACC TCGAGGCCCG CGGCTGTCGA ACCGCCGCGC TGGACGTGAC CGACGGCGAT
CAAATCCGGA CGGTCGTCGA CCGCCTGCTC GCCGCGGACG GACGGATCGA CTGTCTGGTC
AACAACGCCG GGTTCGGGCA GGCCGGAGCC GTCGAAGACG TCCCCGACGA GCGCGTCCGC
GCTCAGTTCG ACGTCAACGT CTACGGTCCG CTCCGACTCG TCCGCGCCGT CCTCCCGCAC
ATGCGCGCTC AGCGGTCCGG GACGATCGTG AACGTCTCGA GCATCATGGG TCGCGTCTCG
TACCCGACGC GTGGCGTCTA CGCGGGGTCG AAACACGCGC TCGAGGGGAT CACCGACGCG
CTCAGAAACG AGGTCGCCGG ATTCGGCGTC GACGTCGTCC TCGTCGAGCC GGGAGCCGTC
GATACCGGAT TCGACGACCG CCTCCGGCGG ACCGACGAAT CGATCGACCG TACGGCGGCG
TACGAGCGCG CCTACGCGGC GATCGATCGG GCGCAGCGTC GGGCCGGTCG GTTCGCGACC
GACCCGGCGG ACGTCGCCGA CGTCATCGCA ACCGCTGCGA CGGCGACCGA TCCCGACCAC
CGGTACGTCG TCGGGCTCGA CGCCCGACTC GTCCTCCTTT CGCGGCACCT GCCGACGCGA
CTCACGGACT GGTTGACCCG ACGGTTGGTC TCCCGAATCG GCTGA
|
|---|
| Protein sequence | MTGDDSRSRS DATEDGRPSA GNDRDSNLTD AASEAAERSS PIDDSVVLIT GSLSGIGHAT
ARAFRARGWR VWATSRDPAD VADLEARGCR TAALDVTDGD QIRTVVDRLL AADGRIDCLV
NNAGFGQAGA VEDVPDERVR AQFDVNVYGP LRLVRAVLPH MRAQRSGTIV NVSSIMGRVS
YPTRGVYAGS KHALEGITDA LRNEVAGFGV DVVLVEPGAV DTGFDDRLRR TDESIDRTAA
YERAYAAIDR AQRRAGRFAT DPADVADVIA TAATATDPDH RYVVGLDARL VLLSRHLPTR
LTDWLTRRLV SRIG
|
|---|
| |