Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_3779 |
Symbol | |
ID | 8745051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013744 |
Strand | - |
Start bp | 92 |
End bp | 892 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 646514367 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003405314 |
Protein GI | 284167036 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00111461 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGTTGTC ACACCATGAC GACTACTGAC TACGAGGTAT CGGGAGAGAC GGCGATCGTC ACCGGGGCGT CGACCGGCAT CGGTCGAGCG ATCGCGGAAC GGTTCGCGGC CGACGGTGTC GACGTCGTCG TCTGCTCCCG CTCGCTCGAG GACCTCGAGG AGGTCGCGGG AGCGATCAAC GACAGCGACC GGCCGGGGAC CGCGCTCGCC GTCGAGTGCG ATATCACCGA CTGGGACGCG GTGGAAGCGC TCGCCGAGGC GACCGTCGAC GAGTTCGGCG GAATCGACAT TCTGGTCAAC AACGCGGGCG CGAGTTTCCA GGCTCCGTTC GAGGAGTTCA GCCAGAACGC CTGGCGAACG ATCGTCGACA TCAACCTCAA CGGCACCTTC AACTGCACAC AGGTCGTCGG CGAGTACATG CGCGAGTCCG GCAGCGGGAC GGTCATCAAC ATCTCCTCCG TGGCCGGCCG CGACGGCGCG CCGCAGATGT CCCACTACGC CGCGTCGAAA GCCGGGATGA ACAACCTGAC GCGGACGCTC GCCTACGAGT GGGCGGAGTA CGGGGTCCGT GTCAACGGGA TCATGCCCGG ACTGATCGTC ACCGAGGGCC TCGAGAGTCA GATGGGTATC AGCGCCGACG AGATCGACCT CGAGGAGGTC GATCGACAGA TCGGCGTTCC GGACGAGATC GCCTCCGTCG CGCAGTTCCT CGCGAGTCCC GCGTCGAAGT ACATCCTCGG CGAGACCGTG ACGGTCGAAG GCGTGCCGCG GATCGCTCGC ACGCGCCACC ACGAGGAGTA A
|
Protein sequence | MCCHTMTTTD YEVSGETAIV TGASTGIGRA IAERFAADGV DVVVCSRSLE DLEEVAGAIN DSDRPGTALA VECDITDWDA VEALAEATVD EFGGIDILVN NAGASFQAPF EEFSQNAWRT IVDINLNGTF NCTQVVGEYM RESGSGTVIN ISSVAGRDGA PQMSHYAASK AGMNNLTRTL AYEWAEYGVR VNGIMPGLIV TEGLESQMGI SADEIDLEEV DRQIGVPDEI ASVAQFLASP ASKYILGETV TVEGVPRIAR TRHHEE
|
| |