| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3645 |
|---|
| Symbol | |
|---|
| ID | 8744271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | - |
|---|
| Start bp | 3753773 |
|---|
| End bp | 3755851 |
|---|
| Gene Length | 2079 bp |
|---|
| Protein Length | 692 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646514232 |
|---|
| Product | DNA ligase, NAD-dependent |
|---|
| Protein accession | YP_003405180 |
|---|
| Protein GI | 284166901 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
|---|
| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTCG CCGACGAGGA TGCGGAAAAC CCCTATCTCC GGGATCCGCC GACCGACTTC
GCGCCGGTCG GGGAGCTCTC GGAGGACGAG GCCCGCGAAC AGGTCGAACT GCTCCGGGAG
GCTATTCGCG AACACGACCG CCGGTACTAC GTCGAGAGCG ATCCCGTCAT CGCCGACCGG
ACCTACGACG CCTTGTTCGC CCGCCTTCGG GACCTCGAGG ACGCCTTCGG CCTCGAACAT
CCCGACAGCC CCACGCGAAG CGTCGGCGGC GAACCGCTCG AGGAGTTCGA GACGGTCGAG
CACGTCGCGC CGATGCTCTC GATCGACCAG AGCGGCGAGG AGGCGGACGT CCGGGAGTTC
GCGGATCGAG TACAACGAGA GGTCGGTGAC GTCGACTACG TCTGTGAACC CAAGTTCGAC
GGCGTCTCGA TGGAGTTCGT CTACGAGGAC GGCCGCCTCG AGCGCGCGGC GACCCGCGGG
GACGGTCGCG AGGGCGACGA CGTGACGCGC AACGCGCGCA CGATCGGCTC CGTTCCACAG
AAGCTCCACG GCGACTACCC CGAGTTCCTC GCCGTGCGGG GCGAGGTCTA CATGCCCAAA
GACGCCTTTC AGGCCCACAA CCGCGAGCGC ATCGAGCGCG GCGAGGAGCC CTTCGCGAAT
CCCCGGAACG CCACCGCGGG AACGATCCGC CAGCTCGACC CCTCGATCGT CGCTGACCGC
CCTCTCGAGG TGTTCTTCTT CGACGTGCTC GAGGCCAGCG ACCTCGAGGA CTCCCACAGC
GCCGAACTCG AGCGCTTTCC CGACTGGGGA CTCCGGGTCA CCGACCACGT CGAACTGGCG
GACGACATCG ACGAGGCGAT CGCCTACCGC GATCGGATGC TCGAGGCCCG CGACGACCTG
AACTACGAGA TCGACGGCAC CGTGATCAAG GTCGACGACC GCGAGTCTCG CGAGGAACTG
GGACGGACGG CCCGTCACGA TCGCTACGCC TTCGCCTACA AGTTCCCCGC CCGCGCGGAG
GTGACGCCGA TCGTCGACGT GGCTGTTCAG GTCGGTCGCA CGGGTCGGCT GACGCCGGTC
GCCCTCCTAG AGCCGGTCGA CGTCGGCGGC GTGACGGTCT CCAGAGCGAG CCTGCACAAC
CCCGACGAGA TCGAGGAGAA GAATGTGAAC GTCGGCGACA CGGTCCGCGT CCAGCGGGCC
GGCGACGTCA TCCCCTACGT CGAGGAGGTC GTCGAGAAGG ACAGCGAGGG TCATTACGAC
CTCCCCGACC GCTGCCCCGT CTGCGACAGC GCCGTCGAAC GCGACGGCCC GATGGCCTTC
TGTACCGGCG GGCTGGCCTG CGACGCCCAG CTCCGGCGAT CGATCGAGTA CTACGCCGGC
GACGACGGCC TCGACCTCGA GGGGCTCGGC GAGAAAAGCG TCCGCCAGCT GGTCGACGCC
GGCTTGCTCG AGTCCGTCGC GGACCTCTAC GAACTCGACC GCGAGGACCT GACCGACCTC
GAGGGCTGGG GCGAGACGAG CGCCGAGAAC GTGCTCGCCG AGATCGAAGC CAGCCGCGAA
CCCCCGTTGG CGGAGTTCCT CTCCGCGCTG GGGATCCCCC ACGTCGGACC GACGACGGCC
CGCGAACTCG CCCGCGAGTT CGGCACGTTC GAGGCGTTCC GCGAGGCCGC CGAGGACGAG
CCCGAACGCC TCGAGGACGT GCCGGACGTC GGCGAAACCG TTGCCGAACA GCTCCACGAG
TTCTTCACCA GCGAGGCCAA CGCTGCGGCG GTCGACGACT TACTCGAGCA CGTCTCGCCC
CAGGAGTCGG ACCTCGAGAC CGGCGGCGAC GAACTCGAGG GACTGACGTT CGTCTTCACG
GGCTCGCTCG AGGGGATGAC GCGCGGAGAA GCGCAAGAAG CCGTCGAGGC CCACGGTGCC
AACGCGACGG GTAGCGTCTC GGGGAACACG GACTACCTCG TTGTCGGCGA GAACCCGGGC
CAGACGAAAC GCGACGACGC GGCGGCCAAC GACGTGCCGA TTATCGACGA GGACGAGTTC
CGGGAGTTAC TGGCGGGGTA CGGAATCGAC CTCGAGTGA
|
|---|
| Protein sequence | MSVADEDAEN PYLRDPPTDF APVGELSEDE AREQVELLRE AIREHDRRYY VESDPVIADR
TYDALFARLR DLEDAFGLEH PDSPTRSVGG EPLEEFETVE HVAPMLSIDQ SGEEADVREF
ADRVQREVGD VDYVCEPKFD GVSMEFVYED GRLERAATRG DGREGDDVTR NARTIGSVPQ
KLHGDYPEFL AVRGEVYMPK DAFQAHNRER IERGEEPFAN PRNATAGTIR QLDPSIVADR
PLEVFFFDVL EASDLEDSHS AELERFPDWG LRVTDHVELA DDIDEAIAYR DRMLEARDDL
NYEIDGTVIK VDDRESREEL GRTARHDRYA FAYKFPARAE VTPIVDVAVQ VGRTGRLTPV
ALLEPVDVGG VTVSRASLHN PDEIEEKNVN VGDTVRVQRA GDVIPYVEEV VEKDSEGHYD
LPDRCPVCDS AVERDGPMAF CTGGLACDAQ LRRSIEYYAG DDGLDLEGLG EKSVRQLVDA
GLLESVADLY ELDREDLTDL EGWGETSAEN VLAEIEASRE PPLAEFLSAL GIPHVGPTTA
RELAREFGTF EAFREAAEDE PERLEDVPDV GETVAEQLHE FFTSEANAAA VDDLLEHVSP
QESDLETGGD ELEGLTFVFT GSLEGMTRGE AQEAVEAHGA NATGSVSGNT DYLVVGENPG
QTKRDDAAAN DVPIIDEDEF RELLAGYGID LE
|
|---|
| |