Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_3412 |
Symbol | |
ID | 8744032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013743 |
Strand | - |
Start bp | 3520872 |
End bp | 3522551 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646513994 |
Product | type II secretion system protein E |
Protein accession | YP_003404948 |
Protein GI | 284166669 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGATT TCGGGACCAA CCGACTCGAG AACGAACTGG ACGCACTGGC CGACGAGTAC CCGCACCTGC GGGAACACCT CGACTGGTTC TACGAGGAGT ACAACGAGTA TCCGAAGCTG ATCGACGAGC CGTCGGGCGA GTGGGAGTCC GACCGGCCGA ACGTGATCTA CGAGGCCGAG GCGCCGATCT TCTGTCACGT CCACGGCGAC CTCGGGATCA GTACCACCTA CTACTGCGTC GAGCCGACCC TCGAAGGCGA GGATCAGGAA CTGTACGACC GCATCCGTCG ACGGATCCTC GATAAGAGCG TCACGCGACC GGCGCCCGGC GACAACGAGG AGTTCGAGGA GCACCTGGAC GAACTCCTCG ACGCCGTCGT CGAGGTGACC TCGGGAATCA CCGGCCAGTC GATCGGTCGG CTCAAGTCCC TCGGCACCAG CAAGATCTCC CTCTCGCGGG ACCAGTTCGA CCGACTGCGC TACCAGCTTC AGCGGGATAT CGTCGGACTC GGACCGCTGG AACCGGTGAT GGTCGACACG GCCAACGAGG ACATCCACGT GATCGGCCCG AGCCAGTGTT ACCTCGATCA CGGCACGTAC GGGATGATCG AGGCGACGGT CGACTTCGGC ACCCCCGCGG AGTTCGAGCA GTGGCTGCGG AACATGGGCG AGCGGATGAA CCACCCGGTC AGCGACTCCG ACCCGGTGAT CGACGCGACG CTGCCCAACG GCTCGCGTAT CAACATCATC TACTCCGACG ATGTCTCCGT ACAGGGCCCC TCGATGACGA TTCGACAGGG CGAGGAGATC CCGCTGTCGA TCTTCCAGAT CACGAAGTGG GGGACGCTCA GCCCGGAGCT GGCGGCCTAC CTCTGGCTCT GTCTCGAGAA CGAACAGACG GTGTTCGTCG TCGGCGAGAC GGCCTCGGGA AAGACGACGA CGCTGAACGC GATCCTCTCG TTCATTCCCC AGGACTCGAA GATCTACACC GCGGAGGACA CGGCCGAGGT GTTGCCGCCC CACGATACCT GGCAGCAACT CCTCACCCGG GAGGGGTCGG GCGACGAGTC GGCCGACGTC GACATGTTCG ACCTAGTCGC GGCCGCGCTG CGTTCGCGTC CCGACTACAT CATCGTGGGC GAGGTCCGCG GGGCGGAGGG GCAGATGGCC TTCCAGGCGG CCCAGACCGG CCACCCGGTC ATGCTGACCT TCCACGCCAG CGACATCGTC TCGATGATCC AGCGGTTTAC CGGCGCCCCG ATCAACGTCC CCGAGACGTT CATGGACAAC TGTGACGTCG CGCTGTTCCA GAACCGGGTC AAGCAGGGCG ACGACGTCCT CCGCCGGGTC ACGTCGGTCC AGGAGATCGA GGGCTACTCC GACTACGAGG GCGGCGTCGT CACCCGGCAG GCGTTCAAGT GGGATCCCCG CGACGACGAG GTCGCATTCA CGGGTCGAAA CAACTCCTAC GTCTTAGAGG AACAGATCGC GACCCTGCTG GGCTATCAGG ACACCCGCGA GATCTACGAC GAACTCGATC GACGCGCGGA AATCATCCGC CAGCTCATTG ACGCCGACGT GCTCGGCTAC CACGAGGTCA ACGACGCCAT CGCCGACTTC CAGCGCGACG GTATCGAGGG GCTGCCGATC CAGATCCGCG GCCTCAACCA GTTCGCCTGA
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Protein sequence | MSDFGTNRLE NELDALADEY PHLREHLDWF YEEYNEYPKL IDEPSGEWES DRPNVIYEAE APIFCHVHGD LGISTTYYCV EPTLEGEDQE LYDRIRRRIL DKSVTRPAPG DNEEFEEHLD ELLDAVVEVT SGITGQSIGR LKSLGTSKIS LSRDQFDRLR YQLQRDIVGL GPLEPVMVDT ANEDIHVIGP SQCYLDHGTY GMIEATVDFG TPAEFEQWLR NMGERMNHPV SDSDPVIDAT LPNGSRINII YSDDVSVQGP SMTIRQGEEI PLSIFQITKW GTLSPELAAY LWLCLENEQT VFVVGETASG KTTTLNAILS FIPQDSKIYT AEDTAEVLPP HDTWQQLLTR EGSGDESADV DMFDLVAAAL RSRPDYIIVG EVRGAEGQMA FQAAQTGHPV MLTFHASDIV SMIQRFTGAP INVPETFMDN CDVALFQNRV KQGDDVLRRV TSVQEIEGYS DYEGGVVTRQ AFKWDPRDDE VAFTGRNNSY VLEEQIATLL GYQDTREIYD ELDRRAEIIR QLIDADVLGY HEVNDAIADF QRDGIEGLPI QIRGLNQFA
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