Gene Htur_3412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3412 
Symbol 
ID8744032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp3520872 
End bp3522551 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content64% 
IMG OID646513994 
Producttype II secretion system protein E 
Protein accessionYP_003404948 
Protein GI284166669 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATT TCGGGACCAA CCGACTCGAG AACGAACTGG ACGCACTGGC CGACGAGTAC 
CCGCACCTGC GGGAACACCT CGACTGGTTC TACGAGGAGT ACAACGAGTA TCCGAAGCTG
ATCGACGAGC CGTCGGGCGA GTGGGAGTCC GACCGGCCGA ACGTGATCTA CGAGGCCGAG
GCGCCGATCT TCTGTCACGT CCACGGCGAC CTCGGGATCA GTACCACCTA CTACTGCGTC
GAGCCGACCC TCGAAGGCGA GGATCAGGAA CTGTACGACC GCATCCGTCG ACGGATCCTC
GATAAGAGCG TCACGCGACC GGCGCCCGGC GACAACGAGG AGTTCGAGGA GCACCTGGAC
GAACTCCTCG ACGCCGTCGT CGAGGTGACC TCGGGAATCA CCGGCCAGTC GATCGGTCGG
CTCAAGTCCC TCGGCACCAG CAAGATCTCC CTCTCGCGGG ACCAGTTCGA CCGACTGCGC
TACCAGCTTC AGCGGGATAT CGTCGGACTC GGACCGCTGG AACCGGTGAT GGTCGACACG
GCCAACGAGG ACATCCACGT GATCGGCCCG AGCCAGTGTT ACCTCGATCA CGGCACGTAC
GGGATGATCG AGGCGACGGT CGACTTCGGC ACCCCCGCGG AGTTCGAGCA GTGGCTGCGG
AACATGGGCG AGCGGATGAA CCACCCGGTC AGCGACTCCG ACCCGGTGAT CGACGCGACG
CTGCCCAACG GCTCGCGTAT CAACATCATC TACTCCGACG ATGTCTCCGT ACAGGGCCCC
TCGATGACGA TTCGACAGGG CGAGGAGATC CCGCTGTCGA TCTTCCAGAT CACGAAGTGG
GGGACGCTCA GCCCGGAGCT GGCGGCCTAC CTCTGGCTCT GTCTCGAGAA CGAACAGACG
GTGTTCGTCG TCGGCGAGAC GGCCTCGGGA AAGACGACGA CGCTGAACGC GATCCTCTCG
TTCATTCCCC AGGACTCGAA GATCTACACC GCGGAGGACA CGGCCGAGGT GTTGCCGCCC
CACGATACCT GGCAGCAACT CCTCACCCGG GAGGGGTCGG GCGACGAGTC GGCCGACGTC
GACATGTTCG ACCTAGTCGC GGCCGCGCTG CGTTCGCGTC CCGACTACAT CATCGTGGGC
GAGGTCCGCG GGGCGGAGGG GCAGATGGCC TTCCAGGCGG CCCAGACCGG CCACCCGGTC
ATGCTGACCT TCCACGCCAG CGACATCGTC TCGATGATCC AGCGGTTTAC CGGCGCCCCG
ATCAACGTCC CCGAGACGTT CATGGACAAC TGTGACGTCG CGCTGTTCCA GAACCGGGTC
AAGCAGGGCG ACGACGTCCT CCGCCGGGTC ACGTCGGTCC AGGAGATCGA GGGCTACTCC
GACTACGAGG GCGGCGTCGT CACCCGGCAG GCGTTCAAGT GGGATCCCCG CGACGACGAG
GTCGCATTCA CGGGTCGAAA CAACTCCTAC GTCTTAGAGG AACAGATCGC GACCCTGCTG
GGCTATCAGG ACACCCGCGA GATCTACGAC GAACTCGATC GACGCGCGGA AATCATCCGC
CAGCTCATTG ACGCCGACGT GCTCGGCTAC CACGAGGTCA ACGACGCCAT CGCCGACTTC
CAGCGCGACG GTATCGAGGG GCTGCCGATC CAGATCCGCG GCCTCAACCA GTTCGCCTGA
 
Protein sequence
MSDFGTNRLE NELDALADEY PHLREHLDWF YEEYNEYPKL IDEPSGEWES DRPNVIYEAE 
APIFCHVHGD LGISTTYYCV EPTLEGEDQE LYDRIRRRIL DKSVTRPAPG DNEEFEEHLD
ELLDAVVEVT SGITGQSIGR LKSLGTSKIS LSRDQFDRLR YQLQRDIVGL GPLEPVMVDT
ANEDIHVIGP SQCYLDHGTY GMIEATVDFG TPAEFEQWLR NMGERMNHPV SDSDPVIDAT
LPNGSRINII YSDDVSVQGP SMTIRQGEEI PLSIFQITKW GTLSPELAAY LWLCLENEQT
VFVVGETASG KTTTLNAILS FIPQDSKIYT AEDTAEVLPP HDTWQQLLTR EGSGDESADV
DMFDLVAAAL RSRPDYIIVG EVRGAEGQMA FQAAQTGHPV MLTFHASDIV SMIQRFTGAP
INVPETFMDN CDVALFQNRV KQGDDVLRRV TSVQEIEGYS DYEGGVVTRQ AFKWDPRDDE
VAFTGRNNSY VLEEQIATLL GYQDTREIYD ELDRRAEIIR QLIDADVLGY HEVNDAIADF
QRDGIEGLPI QIRGLNQFA