Gene Htur_3088 details

Gene Information

• Locus tag: Htur_3088
• ID: 8743708
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013743
• Strand: +
• Start bp: 3169783
• End bp: 3170907
• Gene Length: 1125 bp
• Protein Length: 374 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 646513672
• Product: aminotransferase class V
• Protein accession: YP_003404626
• Protein GI: 284166347
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0520] Selenocysteine lyase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCCCA TCGAGTTGCG CGAGACGATG CCGGCCCTCG AGTCCGGCGC GTATTTCAAC 
TGGGGTGCGG GCGGTCCGAG CCCGCGCCGC GTCGTCGAGG CGGCCGAATC GGCTCTCGAG 
TCCCACGAGT TCGAGGCCCC GACGAGCGAG GGGCAGTATC CCGCGGCGTT CGACGCCTAC 
GACGAGGCGC GAGACGCGAT CGCGGACCTG CTGGGCGTGG CGCCCGCCGA GATCGCGCTC 
ACGGAGAGCA CGACCGACGG GATCAACCGC GTCGCAGGCG CGCTCGACTG GGACGACGAC 
ATCGTCGTTC GAACCGACCT CGAGCACTCC GCGGGAATCC TGCCGTGGCA GCGCCTCGAG 
CGCGAGCGGG GGGTCGATGT GCGGGTTCTC GAGACCGAAC GCGGACGATT GGACCTCGAG 
GACGTGACGG CGGCGGCCGA GGACGCGACG CTGTTCTGCG TGAGTTCGCT CACCTGGACC 
CACGGTACCC GACTGCCGGT GTCCGAAATC GTCGATATCG CCCACGACGC CGGCGCGCTG 
GTCCTCGTCG ACGCCGTGCA GGCGCCCGGC CAGCGACCGG TCGACGTCCG CGAGTGGGGC 
GCCGACTTCG TCGCCGCCGC GGGCCACAAG TGGCTCGTCG GCCCCTTCGG CTCCGGCTTC 
CTGTACGTTC GCGAGGGGCT CGAGCGCGAG CACGACCTCG TTCCCGCCGC GATCGGCTAT 
CGCAGCGTCG TCGACCCGAA CGCCGCCGAG TACGAGTACG CGCCGGGAGC CGGACGGTTC 
GAAGTCGGCA CGGCGAGCCC CGCGCCGCAC GCGGGACTGG CGGAATCGAT CCGGGCGCTC 
GAGGAGGTCG GTCTCGACGC GATCGAATCG CGGATCGAAC GGCTCACCGA TCGGCTCAAG 
GACGGCCTCT CGGACGAGCG ACTGCTGAGT CCGCGCGGCT TCGAGTCCGG CCTCGTCACT 
ATCGACGTCG AGGATCCCGA ATCGACCGTC GAACGGCTTT CCGACGCCGG AATCGTCGTC 
AGGTCGCTGC CCGACCCCGA CGCGATCCGG GCGTCGGTCC ACGCGTTCAA CACCCCTGAG 
GACGTCGATA AGTTGCTCGA GGCGCTCGAG GCGGCGGAAC CGTGA 

 

Protein sequence

MDPIELRETM PALESGAYFN WGAGGPSPRR VVEAAESALE SHEFEAPTSE GQYPAAFDAY 
DEARDAIADL LGVAPAEIAL TESTTDGINR VAGALDWDDD IVVRTDLEHS AGILPWQRLE 
RERGVDVRVL ETERGRLDLE DVTAAAEDAT LFCVSSLTWT HGTRLPVSEI VDIAHDAGAL 
VLVDAVQAPG QRPVDVREWG ADFVAAAGHK WLVGPFGSGF LYVREGLERE HDLVPAAIGY 
RSVVDPNAAE YEYAPGAGRF EVGTASPAPH AGLAESIRAL EEVGLDAIES RIERLTDRLK 
DGLSDERLLS PRGFESGLVT IDVEDPESTV ERLSDAGIVV RSLPDPDAIR ASVHAFNTPE 
DVDKLLEALE AAEP