Gene Htur_2988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_2988 
Symbol 
ID8743606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp3074283 
End bp3075152 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content65% 
IMG OID646513573 
Productapurinic endonuclease Apn1 
Protein accessionYP_003404529 
Protein GI284166250 
COG category[L] Replication, recombination and repair 
COG ID[COG0648] Endonuclease IV 
TIGRFAM ID[TIGR00587] apurinic endonuclease (APN1) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTCG GCGCACACGT ATCCATCTCC GGCTCGCGCG TCTCCTCCGA CGACGAAACG 
CCGCCGTACG ACGATCTCCG CAACGCGGTC CACCGCCAGC GCGCGTTCGG CGGCAACTGC 
GGGCAGATCT TCACCACCTC GCCGCAGGTC TGGGCCCAGC CCGAGATCAG CGACGAGGCC 
GCCGACGGCT TCCGCGAGGA ATCGGACGAG CGACTCGAGG GACCGTGGGT GATCCACTCG 
GCGTATCTGG TCAATCTCTG TACCCCGAAG GACGACCTCC GGCGCAAGTC AAAGGAGAGC 
ATGCAGGCGG AACTCGACGC CGCCGCGCAG TTGGGAATCC CCTACGTCAA CGTCCACCTC 
GGCGCGCATA CGGGCGCGGG CGTCGAAGGC GGCCTCGACA ACGCGGCGAG TCTCATCGAC 
GAACTCGAGG TCCCCGAGGA CGTCCAGATC CTCATCGAGT CCGACGCCGG CAGCGGGACC 
AAGCTGGGCG GCGAATTCTC CCACCTCGCA GGGATCATCG ACCGCACCGA GACCGACATC 
GGCATCTGCA TCGACACCGC CCACACGCTC GTCGCCGGTA ACGACCTCAC GACGCCCGAA 
GCGGTCGACG AAACCGTCGG GCGGTTCGAC GACGAGGTCG GCCTCGAGTA CCTCGAGTAC 
ATCCATCTCA ACGACTCGAA ACACGACGTC GGCACCCACA AGGACGAACA CGCGCTCATC 
GGCGAGGGCT ACATCGGCGA GGACGGGATG AAAGCGATCG TGAACCATCC CGATCTGCGG 
GACCTGCCGT TCGCGCTCGA GACGCCGACG GAAGACGGGA AAGGCTTCGC GTGGAACATC 
GAGAAGGTAA AAGAGCTGCG AGACGCGTAA
 
Protein sequence
MKVGAHVSIS GSRVSSDDET PPYDDLRNAV HRQRAFGGNC GQIFTTSPQV WAQPEISDEA 
ADGFREESDE RLEGPWVIHS AYLVNLCTPK DDLRRKSKES MQAELDAAAQ LGIPYVNVHL 
GAHTGAGVEG GLDNAASLID ELEVPEDVQI LIESDAGSGT KLGGEFSHLA GIIDRTETDI 
GICIDTAHTL VAGNDLTTPE AVDETVGRFD DEVGLEYLEY IHLNDSKHDV GTHKDEHALI 
GEGYIGEDGM KAIVNHPDLR DLPFALETPT EDGKGFAWNI EKVKELRDA