Gene Htur_2256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_2256 
Symbol 
ID8742860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand+ 
Start bp2324866 
End bp2325780 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content70% 
IMG OID646512839 
Productpseudouridylate synthase TruB domain protein 
Protein accessionYP_003403809 
Protein GI284165530 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0130] Pseudouridine synthase 
TIGRFAM ID[TIGR00425] rRNA pseudouridine synthase, putative
[TIGR00431] tRNA pseudouridine 55 synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGATC GCTCTCGCCT CCGCGGTCCG CCCGAGGACC GCACGCCCGC GGAACTGCTC 
ACGTTCGGCG TCGTCAACCT CGACAAGCCG CCGGGACCCT CTTCGCACCA GGTCAGCGGC 
TGGTTGCGCG ACGCGGTCGA CGAAACGCTG GCCGACCGCG CCCCCGACGC GACGATCGAG 
CAGGCAGCCC ACGCCGGGAC GCTCGATCCC AAGGTCACCG GCTGTCTCCC GGTCATGCTC 
GGCGAGGCGA CCCGACTGGC CCAAGTCTTC CTTGAGGGCC ACAAGGAGTA CGTCGCCGTC 
CTCGAGTGTC ACGCGCCGGT GCCGGCTGAC GCCGAATCGG TCGTCGCCGA GTTCGAGGGA 
CCGATCTACC AGAAGCCCCC ACGCAAGAGC GCGGTGGCCC GACGCCTGCG CGTGCGCGAG 
ATTTACGACC TCGAGGTCCT CGAGACCGAC GAGCGTCGGC TCCTGTTGCG CATCCGGTGT 
GAGAGCGGGA CCTACGTTCG GAAGCTCTGT CACGATCTGG GGCTGGCGCT GGGCACCGGC 
GGCCACATGG GCCACCTGCG GCGGACGGCG ACCTCGCCGT TCGACGACCG GGACCTGCAC 
TCGGCCCACG ACTTCCTCGA CGCGCTGGCG TACTGGCGCG AGGACGGCGA TCCCGAGGTA 
CTGCTCGACG TGGTCGACCC CGCCGAACGC ATCCTCGAGG GGCTCCCCGG CGTGGTGATC 
GCCCCAAGCG CGGCCCGGGA GGTCGCCAAC GGCGCGCCGG TGTACGATCC CGGCGTGCTC 
GAGGTCGACG ACGAGGCTCG TGCGGGTGAG CTGGTTGCCT GCTACACGCC CAACGGGGCC 
GCGGTGTGTC TCGGCGAGTT CGTCGACGAT GCGAGTCGCG ACGTGACGGT GGACCTCGAG 
CGCGTGCTGG TCTGA
 
Protein sequence
MADRSRLRGP PEDRTPAELL TFGVVNLDKP PGPSSHQVSG WLRDAVDETL ADRAPDATIE 
QAAHAGTLDP KVTGCLPVML GEATRLAQVF LEGHKEYVAV LECHAPVPAD AESVVAEFEG 
PIYQKPPRKS AVARRLRVRE IYDLEVLETD ERRLLLRIRC ESGTYVRKLC HDLGLALGTG 
GHMGHLRRTA TSPFDDRDLH SAHDFLDALA YWREDGDPEV LLDVVDPAER ILEGLPGVVI 
APSAAREVAN GAPVYDPGVL EVDDEARAGE LVACYTPNGA AVCLGEFVDD ASRDVTVDLE 
RVLV