Gene Htur_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_2179 
Symbol 
ID8742781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp2258242 
End bp2259174 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content71% 
IMG OID646512761 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003403733 
Protein GI284165454 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGCA TTCGCGATCT CGTTCGCTTT CTCGCGCTCG CGACCGTCTG GGGCTCCGCG 
TTCGTCGCGA TCAGCGCCGG CCTCGAGTAC TTCCCGCCGG TGTTGTTCGC CGCTTTCCGG 
TACGACGTCG CGGGCGTCCT GATGCTCGCC TACGCCGCCG TCGCGGTCGA CGACTGGCGA 
CCCCGCGGCC GCGGCGAGTG GTCGCTGGTC GCCGTCGGCG CCGTCCTGTT GATCGCGGCC 
TACCACGCCT TCCTCTTCAT CGGCCAGCAG CACACGACGG CGGCCGCGGC CGCGATCGTC 
GTGAGCCTCT CGCCGGTGCT GACCACCGGG TTCGCGCGCC TGCTCGTCCC GTCGGACGCG 
CTCTCGCCGG TCGGCGTCGG CGGTCTCCTG TTCGGCCTGC TCGGCGTCGC GGTCGTCGCG 
CGTCCCGATC CGTCGAACCT GCTGTCGGTC GACGCCGTCG CGACGGGACT CGTCTTCTGT 
GCGGCCGCCG CCTTCGGACT GGGCAGCGTC CTCACGCGCC GAATCGACGC CTCGCTCCCG 
ATCGAGACGC TGGAAGCCTG GTCGATGATC GGCGGCGCAC TCCTGATGCA CGCCGTCAGC 
CTGGCGCTCG GCGAACCGCT CGAGCCGTCG GCGTGGACCC ATCCCGAGGC GCTCGGCGCG 
CTGGGCTACC TGTCGCTGGT CGCCAGCGCG CTCGGCTTTC TGCTCTACTT CGATCTGCTC 
GAGCGGCTGG GCGCCGTCGA GATCAACATG GTCTCCTACG TCGCACCGAT CGTCGCCGCC 
GTCGTCGGCT GGCTCTACCT CGGGGAAGTC ATCGACGCGA CGACGGCCCT CGGCTTCGGC 
TTCATCGCAG TCGGGTTCGT CCTCGTCAAG CGACGGGCGC TGCGCGAGGA GTTCGGGCAC 
GCACTGGAGT GGGGCCGGTC CTCGAGCGAG TGA
 
Protein sequence
MSRIRDLVRF LALATVWGSA FVAISAGLEY FPPVLFAAFR YDVAGVLMLA YAAVAVDDWR 
PRGRGEWSLV AVGAVLLIAA YHAFLFIGQQ HTTAAAAAIV VSLSPVLTTG FARLLVPSDA 
LSPVGVGGLL FGLLGVAVVA RPDPSNLLSV DAVATGLVFC AAAAFGLGSV LTRRIDASLP 
IETLEAWSMI GGALLMHAVS LALGEPLEPS AWTHPEALGA LGYLSLVASA LGFLLYFDLL 
ERLGAVEINM VSYVAPIVAA VVGWLYLGEV IDATTALGFG FIAVGFVLVK RRALREEFGH 
ALEWGRSSSE