Gene Htur_1814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_1814 
Symbol 
ID8742408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand+ 
Start bp1888948 
End bp1889937 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content61% 
IMG OID646512392 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003403372 
Protein GI284165093 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTT TTTTAGCATT ACTGCGTAGC GTCCGGCGTA AACGAGACGA GGGCGACGAG 
CACCGCGTCA GGACGGACGG AGGGACCGCC GAGGAGCGCT CGACGCTCCG ACGCTGGCTC 
GACAGCGACA TCGTGCAGTC GTCGCCGTTC TGGCTGCCAC CGTTCCTGTT GATGGGCTTT 
TTCGTCTACG CCGCGATCGG CTGGAACCTC CTGCTCTCAC TGACGGAGTA CTCCGGATTC 
GGAGATCCCG ATTACAGCAA CCTCGGTCTG CACAACTACC GGGCGATGCT GGACGATCCG 
GGGATGTGGG CGGCGACGCG AAACACGTTC GTCCTCCTCA TCGGATTCAC GGTCGTCTGT 
CTGATCGTCG GCCTCCTGCT GGCGCTGCTG CTCGACCGTG AGATCCGGTT CAGCAGGTCG 
TTTCGGACGA TCTATCTCCT CCCGTTCGCC CTCTCGTTCA TCGTCACGGC CCAGTTCTGG 
CGATGGATGT ACAACGTGAA CAACGGTATC GTCAACCAAT TCATCGGGCT CTTCGGCCTC 
GGGCCATACA ACTGGCTGGG GAGTCCCCGT CTCGTGTTGG GGGCGGTGAT CTTCGCGCTC 
GTCTGGCAGT TCAGCGGGTA CACGATGATC ATCTACCTCG CCGCGCTCCG GTCGATCCCG 
AACGACCAGT ACGAGGCCGC GCGAGTCGAC GGAGCGAACA CGCTTCGGAT GTATTGGCGC 
GTGATTATTC CGCAGTTACG GCCGGCGACG GTCAGCGCGT CCGTCGTGTT AGTGCTGTTC 
GCGCTGAAGG CCTTCGACTT CCTGTACGCG ACCTTCGACG GCTACCGACC CCGTCGTGGG 
GCCGACATCC TGGCGACCAA GATGGTCCGC GAGTCGTTCG GTCGATCCGA GTGGGCGTAC 
GGGTCGTCGA TCGCGATCAT GTTGTTCGTA GTGTCGCTGG CAGTCATCGC GCCGTACCTG 
TACAATCAGT ATAAGCGAGG GAATCTATGA
 
Protein sequence
MKRFLALLRS VRRKRDEGDE HRVRTDGGTA EERSTLRRWL DSDIVQSSPF WLPPFLLMGF 
FVYAAIGWNL LLSLTEYSGF GDPDYSNLGL HNYRAMLDDP GMWAATRNTF VLLIGFTVVC 
LIVGLLLALL LDREIRFSRS FRTIYLLPFA LSFIVTAQFW RWMYNVNNGI VNQFIGLFGL 
GPYNWLGSPR LVLGAVIFAL VWQFSGYTMI IYLAALRSIP NDQYEAARVD GANTLRMYWR 
VIIPQLRPAT VSASVVLVLF ALKAFDFLYA TFDGYRPRRG ADILATKMVR ESFGRSEWAY 
GSSIAIMLFV VSLAVIAPYL YNQYKRGNL