Gene Htur_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_0478 
Symbol 
ID8741054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp497198 
End bp498157 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content66% 
IMG OID646511051 
ProductTranscription factor TFIIB cyclin-related protein 
Protein accessionYP_003402049 
Protein GI284163770 
COG category[K] Transcription 
COG ID[COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCC CATCCCGCCA GCGCGAACGC GAATCAGCAT CGACCGAAAC CACAGATCAA 
CGCGAGCGCG AGCGGGCGTG TGACGAGTGT TCCGACGGAA CGCTCGTCAC GAGCGAGGAT 
CAGGGCGAAC TCGTCTGCGA TCAGTGCGGA CTCGTCGTCG AAGGCTCGAA CATCGACCAC 
GGCCCGGAGT GGCGCGCGTT CAACCACTCG GAGCGACAGA GCAAGTCCCG CGTCGGCGCG 
CCGACGACCC AGACGATGCA CGACAAGGGG CTGACGACCT CCATCGACTG GAAGAACCAG 
GACGCCTACG GCCGCTCGAT CTCTGCGGAC AAGCGCAGCC AGATGCGCCG CCTGCGCAAG 
TGGCAGGAAC GCATCCGCAC CAAGGACGCC GGCGAACGCA ACCTACAGTT CGCCCTCAGC 
GAGATCGATC GGATGGCCTC CTCGCTGGGC ATTCCCCGGT CGGTCCGCGA GGTCGCCTGC 
GTCATCTACC GCCGCGCGTT AGACGAGGAC CTCATCCGCG GGCGCTCCAT CGAGGGCGTC 
GCCACCAGCA CCCTCTACGC CGCCTGCCGC ATGGAGGGCA TTCCCCGCAG CTTAGAGGAG 
GTCGCCGCCG TCTCCCGCGT CGAGCGCAAG GAGATCGGCC GCACCTACCG CTACGTCGCC 
CAGGAGCTCA GCCTCGAGAT GGAGCCCGTC GATCCGAAAC AGTACACGCC GCGCTTTTGC 
TCGGAGCTCG ACCTCTCGGA GGAGGTCCAG GCCAAGGCCA CCGAGATCAT CGACACGACG 
ACCGAGAAGG GACTGCTGTC GGGCAAGTCG CCCACGGGCT ACGCCGCCGC CGCGATCTAC 
GCCGCCTCGC TGCTCTGTAA CGAGAAGAAG ACTCAGCGCG AAATCGCCGA GGTCGCGCAG 
GTGACCGAGG TGACGATCCG GAATCGGTAT CAGGAGCAGA TCGAAGCGAT GGGTATCTAG
 
Protein sequence
MARPSRQRER ESASTETTDQ RERERACDEC SDGTLVTSED QGELVCDQCG LVVEGSNIDH 
GPEWRAFNHS ERQSKSRVGA PTTQTMHDKG LTTSIDWKNQ DAYGRSISAD KRSQMRRLRK 
WQERIRTKDA GERNLQFALS EIDRMASSLG IPRSVREVAC VIYRRALDED LIRGRSIEGV 
ATSTLYAACR MEGIPRSLEE VAAVSRVERK EIGRTYRYVA QELSLEMEPV DPKQYTPRFC 
SELDLSEEVQ AKATEIIDTT TEKGLLSGKS PTGYAAAAIY AASLLCNEKK TQREIAEVAQ 
VTEVTIRNRY QEQIEAMGI