Gene Htur_0378 details

Gene Information

• Locus tag: Htur_0378
• ID: 8740945
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013743
• Strand: +
• Start bp: 405553
• End bp: 407433
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 646510944
• Product: TrkA-N domain protein
• Protein accession: YP_003401951
• Protein GI: 284163672
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGCGG CAGAAGGCGG TAATCTACTG GTACTGATCG CCACGATCGT CGGTCTCGGC 
GTCATCTCGC AACTGCTGTC CGCCCGGTTT CGGGTCCCGA GCGTCCTCTT TCTCATCATC 
TCCGGTGTCG CCATCGGTCC GGAGGGGCTC GGCCTGTTGA CGCTCGACTC CTTTGGCGAA 
AGCGGGCTCT CGACGATCGT CGGGCTGAGC GTCGCTATCA TCGTGTTCGA GGGCGCGTTT 
CACCTCAAGG CAACCAAGAT CAAGGAGGCA CCGTCGGCCG TCCTGCGGCT GACCACGGTC 
GGCGCGGCGA TCGCCTTCCT CGGCACCGCC GCCGCGGTTC GGTTCTTCCT CGAGGCCAAC 
TGGGACATCG CGCTGTTAAT CGGCGCGCTG CTGATTGCGA CGGGGCCGAC GGTGATCACG 
CCGATTTTGA AAGTGGTTCC CGTCCGCGAC CGAGTCGCCG CCACCCTCGA GACCGAGGGG 
ATCGTCAACG ACGTGACGGC GGCGATCCTC GCGGTTGTGC TGTTCAAGGC GATGACCGTC 
CGGGAACTGA CCGCCGACAT CTACCTACAG TTGTTCGCCG AACGACTCGG AACGGGACTG 
CTCGTCGGCG TCGTCGTCGC CGCGATCGTC TGGGCGGTGC TCCAGTACGT CGACATCTCG 
CCGGACGACG CGCCGCGGAA CGCGCGGCTG CTGACACTGG CGGGCGCGAT CGTCGCCTTC 
GGCACGGCCG ACTACGTGTT CGCGGAGGCC GGCGTCGCAG CGGCCGCGAC GGCGGGACTG 
ATCCTCGGCA ACGCCAACCT CCCCTACGAG GAGGAGATCG AGGCGTTCAA GGGCGACGTG 
ACGCTGCTCG TCCTCTCGTT CGTCTTCATC ACGCTCGCGG CCCTGCTCGA GTTCGACCAG 
CTGTTCGCGC TCGGACTCGG CGGTGTGGCC GTCGTCGTGG CCGTCATGCT CGTCCTGCGG 
CCGCTGCTGG TCTTCCTCTC GACGCGCGGC GACCGATTCA CCTTCGAGGA GACGGTGTTC 
ATGAGCGCCG TCGGCCCGCG CGGGATCATT CCGGCGTCGG TCGCGACGCT GTTCGCCATC 
CGATTGCAGA CCGAGGCGCC GCCGACGAAC GCGGCCGGTG CGGACCTGCT CGTCGGCACG 
GTCTTCCTCG TCATCCTCGT GACGGTCGTC CTCGAGGGCG GATTCGCCAG ACAGATCGCG 
GAGAAACTCG ACGTAATTCC AATGCGTGTA CTCATCATCG GCGGCGGCCG CGTCGGTCGC 
TCGCTGGCAG AACGACTCGA AGCGCGCGGC GAAAACGTGG TCATCATCGA GGCGGATCTC 
GCTACCCTCG AGGCTCTTCG CAACGAGGGG TTCACCGCCC GTCGGGGTGA CGGGACCGAC 
GTCGACATGT TACGCGAGGC GGGCGCCGAG AACGCCAAGA CCGTCGTCGC GGCGACCGGC 
GACGACGACG CGAACCTGCT CGTGGCACAG CTCGCGAAGT CGAACTTCGA CGTCGAGAAC 
GTGATCGCCC GGGCGAACAA CCCGTCGAAC GCGTCGGCGT TCGAGGACCT GGGCGTCCAG 
ACCATCTCGG CGGCCGAGTC GACCGCGTGG GCGATCGACA ACCAGATAGA GCGGCCGGCG 
CTCTCGAACT GGATGTCCGA ACTCGGCCGC TCCGGCGACG TCCAGGAGAT CGAGATCACC 
GACGACGCCC TCGTCGGCGA GCGGATCGTC GACATCGGCG ACGACCTCCC CAACGGCGTC 
CTCATCGCGC TCGTGAGCCG GAACGGCACC AGCGAGGTGC CCACGCCCGA CGTCGAACTG 
CAGCGGGGCG ATCACATCAC GCTCATCGGT CGCAACGAGG CGGTAAGCGA GGCGATCGAG 
CGGTACGGCA AGCCGGTGTA G 

 

Protein sequence

MTAAEGGNLL VLIATIVGLG VISQLLSARF RVPSVLFLII SGVAIGPEGL GLLTLDSFGE 
SGLSTIVGLS VAIIVFEGAF HLKATKIKEA PSAVLRLTTV GAAIAFLGTA AAVRFFLEAN 
WDIALLIGAL LIATGPTVIT PILKVVPVRD RVAATLETEG IVNDVTAAIL AVVLFKAMTV 
RELTADIYLQ LFAERLGTGL LVGVVVAAIV WAVLQYVDIS PDDAPRNARL LTLAGAIVAF 
GTADYVFAEA GVAAAATAGL ILGNANLPYE EEIEAFKGDV TLLVLSFVFI TLAALLEFDQ 
LFALGLGGVA VVVAVMLVLR PLLVFLSTRG DRFTFEETVF MSAVGPRGII PASVATLFAI 
RLQTEAPPTN AAGADLLVGT VFLVILVTVV LEGGFARQIA EKLDVIPMRV LIIGGGRVGR 
SLAERLEARG ENVVIIEADL ATLEALRNEG FTARRGDGTD VDMLREAGAE NAKTVVAATG 
DDDANLLVAQ LAKSNFDVEN VIARANNPSN ASAFEDLGVQ TISAAESTAW AIDNQIERPA 
LSNWMSELGR SGDVQEIEIT DDALVGERIV DIGDDLPNGV LIALVSRNGT SEVPTPDVEL 
QRGDHITLIG RNEAVSEAIE RYGKPV