| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_0028 |
|---|
| Symbol | |
|---|
| ID | 8740591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | - |
|---|
| Start bp | 27462 |
|---|
| End bp | 29603 |
|---|
| Gene Length | 2142 bp |
|---|
| Protein Length | 713 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646510591 |
|---|
| Product | putative phytochrome sensor protein |
|---|
| Protein accession | YP_003401602 |
|---|
| Protein GI | 284163323 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCCC CGCCGCGATC ACGACCGCGT ACGGTGATCT ACCTCGCCGA GATCGACGCC
GCGGCCCGCG ACGGCGCGGC CGCCCTCGAG CGCGTCGACT CGGGCCCACA GCGGCTGGTC
CAGCCGCTGA CGACGGACGC GGTCGACAGT CTGGGCAGTT GGGCGGCCGA GGCCGACTGC
GTCGTCTTCG CGGAGACGCC GACGACCGCG GCGGGAGCCA CGCTGCTCGA GGCCGTCGAG
GCCTGCGGGT CGACGCCGGT GATACTCTTC TCCGAGGCCA CGTACGCGCC GTCGGCCGCG
CGATCGACCG ACGGAATCGA CGGCTACGTC CGTCGAGGGA CCGACGACGC CGTCGCCCAC
CTCGCGGACG AGATCGAGTG GGTCTGCGCC GGCGAGCGCG CGGCCGCGGC GACGGCGCTG
CCCGCCGCAG ATTCGGACGC GGAGTCGGAC GCCGTCGAGA CGAGCGATAC CGACGACGTG
GCCGATACCG GTGACGCGAC CGGACGGCCG ACCGCCGAAC TCCTCGAGTC GCTCCCCGAC
GTCGCCGCCT GCGAGGAGCG CGACCGACTC TTCGAGCGCC TGGTCGCGAC CGCCGCCGAC
GCTGTCGGGA CCGAGTACGG CTGGCTGTCG ACGGTCCACT TCGGCGAGTT GACGCCGCGG
GCGACCACCG ACGCGGTCGC GGCCGAAGAC CTCGAGCCGA TCTCCCGAAA CGGCCTGCTC
GACGAGGCGC TGCGAACCGG CGAACCGATT CGGATCGATG ACCTCGCGGC CGACGGGTGC
CCGGAGGCGC CCCTCGAGGG GATGGAATCG CTGTGCTGCG TGCCGGTCGC CGACGTCGGT
CTCCTCCTGC TCGCCGCCGC GGAACCGGCG GCGTTCGACG ACCGCGATCG CGACCTGCTC
GCCGCGTGGG GACGAGTCGG GGCCGCCGTC CTCGAGCGCG TAGAGACCGA AACGAACCTG
CGGACCGATC GCGATCGACT GCGCCAGGAA CTGGACCGCG CCGAGGAGAT TCGAGACCGA
ATCGCCGCCG AGCGCGACGA ACTGGCGGCC GAGCGCGATC GCCTCGTCGC GGAACGCGAC
CGCGCCCGAG CGCTGTTCGC GACCGTCCCG GAGCCGGCAG TCCACTACGA GATCGACGAC
GGACAGCCGA TCGTCAGGCG CGTCAACGAC GCGTTCACCG ACGTCTTCGA CACCGGTCCG
GCGGCGGTCG TCGACGAACC GCTGGACGCA GCCACCGTCC CGCCGGGGCT CGAGCACCGT
CAGGCGACGC TGACAGAAGC GTTGCGGGCC GGTCAGCGCC GACAACTGGT CAGCCGGCGC
GAGACCGTCG ACGGCGTCCG CGAGTTCCGC CTGGCGCTAG TTCCGCTCGA GGCGGCCGAA
GCGGACGGGG CGACGGCTCA CAACCCCGAG GGGCTGATCG TCTACAGCGA CGTCACCGAC
GCGAACCGCC GGGAGCGAGA GCTGGCGGCC ACCGAGGCGC GTCTCGAGTC GATCGCCGAG
AGCCTCGAGA CGGACGTCCG AACGCCGCTG AACGTCGCCC GAGGGTATCT CGAACTCGCC
GAGGAGACCG GCGACGCGGA GCACTTCGCT GAGGTCGAGA CGGCCCAGGA ACGGCTCCGC
GAGCGCGTCG CGGAGCTGCG CGCGATCGCC CGTCGGGACC AGATGGCCAT CGAGACCGAA
CCCGTCGCCG TCACCGACGT CGCGCGCCGG GCCTGGATCG CCGTCGACAG CGGCGACGCG
CGGCTCGTGA CCCGCGAGGA CCGCGTCCTC GAGGCCGACA AGGCGCAGTT GCGGGAGCTG
TTCGAGTACC TGCTGCGGGC GGCGGTCGAG AGCGTCGGCG CCGATGGTGA CGGGAAGGGG
AGCGACGACG CCGCGGCCGG CGACGCGCCG ATCGTTACCG TCGGGGCGAC CGACGACGGG
TTCGCCGTGA CCGGCCACCC CGCGGGGACC GACGTGACGC CGATCGGGCG AGAGATGATG
CCCGTTCCCG GCCGGCTGAC CGCCGCCGAC GGCACCGGAT TCGGGCTCGG ACCCGTCGAA
CGGATCGCCG ACGCCCACGG CTGGGACGTC GGCGTCGCCA CCGACGAGGG AGCTACGTTC
GCGTTTCGCG GGATCGACCC GGTCGACGTG AGTCGTGACT GA
|
|---|
| Protein sequence | MTPPPRSRPR TVIYLAEIDA AARDGAAALE RVDSGPQRLV QPLTTDAVDS LGSWAAEADC
VVFAETPTTA AGATLLEAVE ACGSTPVILF SEATYAPSAA RSTDGIDGYV RRGTDDAVAH
LADEIEWVCA GERAAAATAL PAADSDAESD AVETSDTDDV ADTGDATGRP TAELLESLPD
VAACEERDRL FERLVATAAD AVGTEYGWLS TVHFGELTPR ATTDAVAAED LEPISRNGLL
DEALRTGEPI RIDDLAADGC PEAPLEGMES LCCVPVADVG LLLLAAAEPA AFDDRDRDLL
AAWGRVGAAV LERVETETNL RTDRDRLRQE LDRAEEIRDR IAAERDELAA ERDRLVAERD
RARALFATVP EPAVHYEIDD GQPIVRRVND AFTDVFDTGP AAVVDEPLDA ATVPPGLEHR
QATLTEALRA GQRRQLVSRR ETVDGVREFR LALVPLEAAE ADGATAHNPE GLIVYSDVTD
ANRRERELAA TEARLESIAE SLETDVRTPL NVARGYLELA EETGDAEHFA EVETAQERLR
ERVAELRAIA RRDQMAIETE PVAVTDVARR AWIAVDSGDA RLVTREDRVL EADKAQLREL
FEYLLRAAVE SVGADGDGKG SDDAAAGDAP IVTVGATDDG FAVTGHPAGT DVTPIGREMM
PVPGRLTAAD GTGFGLGPVE RIADAHGWDV GVATDEGATF AFRGIDPVDV SRD
|
|---|
| |