Gene Htur_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_0022 
Symbol 
ID8740585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand+ 
Start bp22117 
End bp22755 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID646510585 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003401596 
Protein GI284163317 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCAA TTTTCGATAT CGCGCATCCT GATCTCGCGT TGACGCCGAC GATCCGGGAC 
CGTCCGGACG CGTCCATCGA GGTCGTCCCC CACTCCACGA CGGACCCGGA GACCGGACTG 
TTCTTCTACC TCGTCGAGGG TGCCGACGAG GCGGTCGAGG ACGTCCTTGA GCAAGACCAC 
ACGGTGACGG ACTGGATGCT CGCGGACGAC CTCGGTTCGG CGCGAATCTA TCGGCTCCAG 
CACTCCGAGG AGACCGTCCT CATCTCGCCG CTGACGACCG AACTCGGCGG GCTGCTGTTA 
AACGCGGAGA CCACCGGACG TGGCTGGACG ACCCGCGTTC AGCTTCCCGA CCGGGAAGCG 
CTCGCCGACC TCTGGGACTG CTGTGAGACG CGGGACATCT CGTTTGAACT GCGCCGGATG 
TTTCGGCGCG ACGAGTGGAC CGGCGAGACG TTTCCGGAGG TAACCGACAA ACAACGCGCC 
GCGCTGGTCA GCGCCCATGA GGAAGGCTAC TTCGAGGAGC CCCGCGAAAT CTCGCTCGAG 
GAACTCGCCG AACAGCTCGG CATCTCGTCG ACGGCCGCCG GCGGGCGCAT CCGCCGCGGG 
ACCGGGCAAC TCGTGGCGTC GACGCTCCGC GAGGAGTGA
 
Protein sequence
MIAIFDIAHP DLALTPTIRD RPDASIEVVP HSTTDPETGL FFYLVEGADE AVEDVLEQDH 
TVTDWMLADD LGSARIYRLQ HSEETVLISP LTTELGGLLL NAETTGRGWT TRVQLPDREA 
LADLWDCCET RDISFELRRM FRRDEWTGET FPEVTDKQRA ALVSAHEEGY FEEPREISLE 
ELAEQLGISS TAAGGRIRRG TGQLVASTLR EE