Gene Htur_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_0001 
Symbol 
ID8744406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp155 
End bp2011 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content63% 
IMG OID646510564 
Productorc1/cdc6 family replication initiation protein 
Protein accessionYP_003401575 
Protein GI284163296 
COG category[L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1474] Cdc6-related protein, AAA superfamily ATPase 
TIGRFAM ID[TIGR02928] orc1/cdc6 family replication initiation protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGACG ACGATTCAGA ACGGACGAGA GCAGATGAGG TCGAGCAGGT GGATACTGAC 
GAGACCGGCG GGTTCTCGAG TTTCGACGGG TCCGAGCTCG CCGACGAGGA GCCGAGCCAG
GGGCTGTTCG ACGACCTGCT CAGCGGCGAA CCGATCTTCG AGAACAAGGA GGTCCTGCGA
CCGTCCTACA CGCCACACGA ACTCCCCCAT CGGAGCGATC AGATCAACAA GATGGCGACG
ATTCTCGTCG CTGCGCTCCG CGGCGAAACG CCGTCGAACA TCCTCATCTA CGGCAAGACC
GGAACCGGCA AGACCGCCAG CGCGAAGTTC GTCAGCAAGG AACTCGAGAG CACCTCCCAG
AAGTACAGCG TGCCGTGTGA CGTCGAGTAC ATCAACTGCG AGGTCACCGA CACCCAGTAC
CGCGTGCTCG CGCAGCTGGC CAACAAGTTC ATCGAGAAGA ACGAAGCCCG GATCGACGAC
CGGATCGACG ACCTCGAGTC GCTGCTTGAG GCCGTAGACG AGTACGAGGC CACCAGCGCG
GACGCGGACG CCGCCGTTCG ATCCGAAATC GAGGGCGACC GCGTCGACGA GGACGATCCG
TTCGAATCGG TACTTCCGGA CGACGACGAA TCGGCTTCGA CTGGAACCGA AACCGGCCCG
GCCTCTGACG AATCTCCACT CGAAACGGAG GGGTCTTCGA ACGAAGCAGG CGGTCCGTCG
AACGCGGCTA TCGACGACTC GGACCCGACC AGGCGGAACG ACCCGAATCG ACTACCGGCC
GACGGCGACG CACAACGGCC TGACGACGAC TTCAACCGCG AGGCTACCGA TCTCGACCGA
AGCGACACTG GCTCGAGCGA CGGCCGATCC GATGACGGCT CGCCGAACCA CCCCCTCGCC
TCGACGCCGT TCGATTCCCG GGAGGGCGTC GAGGCCGAAA TCGAGTCCCT CGAGGCGGAC
AAGGAGTCCT TCGAGGAGGT CCCGATGACC GGCTGGCCGA CCGACCGCGT CTACAGCGTC
TTCTTCGACG CCGTCGACTA CGACGAGCGG GTCGTCGTCA TCATGTTAGA CGAGATCGAC
AAGCTCGTCG AGAAGAGCGG CGACGACACG CTCTACAACC TCTCGCGGAT GAACTCCGAA
CTCGAGAACT CCCGCGTGTC GATCATCGGT ATCTCGAACG ACCTGAAGTT CACCGACTTC
CTCGATCCAC GCGTCAAGTC CTCGCTGGGC GAGGAGGAGA TCGTCTTCCC GCCCTACGAC
GCCAACCAGC TGCGGGATAT CTTAGAGCAC CGCTCGGAGG TCGCGTTCAA GGGCGGCGCC
CTCTCCGAGG ACGTCATCCC GCTGTGTGCG GCCTTCGCGG CCCAGGAACA CGGAGACGCG
CGTCGCGCGT TGGACCTCCT CCGGACCGCG GGCGAACTCG CCGAGCGCTC CCAGGCCGAG
ACGATCGTCG AGGAACACGT CCGCGAGGCC CAGGACAAGA TCGAACTCGA CCGCGTCGTC
GAGGTCGTTC GCACGCTGCC CACGCAGTCG AAACTCGTCC TCTTCGCGAT CATCTTACTC
GAGAAAAACG GCGTCCACAG CATCAACACG GGCGAGGTGT TCAACATCTA CAAGCGCCTC
TGCGAGGAGA TCGACGCCGA CGTCCTCACC CAGCGTCGCG TGACGGACCT CATCAGCGAA
CTCGACATGC TCGGGATCGT CAACGCCGTC GTCGTCTCGA AGGGCCGCTA CGGCCGCACC
AAGGAGATCA GCCTCTCCGT GCCGCTCGAG GAGACGGAGG CCGTCCTCCT CTCGGATTCT
CGGCTTTCCG ATATCGACGA CGTCCAGCCG TTCGTCCAGG CGCGGTTCGA GAACTGA
 
Protein sequence
MSDDDSERTR ADEVEQVDTD ETGGFSSFDG SELADEEPSQ GLFDDLLSGE PIFENKEVLR 
PSYTPHELPH RSDQINKMAT ILVAALRGET PSNILIYGKT GTGKTASAKF VSKELESTSQ
KYSVPCDVEY INCEVTDTQY RVLAQLANKF IEKNEARIDD RIDDLESLLE AVDEYEATSA
DADAAVRSEI EGDRVDEDDP FESVLPDDDE SASTGTETGP ASDESPLETE GSSNEAGGPS
NAAIDDSDPT RRNDPNRLPA DGDAQRPDDD FNREATDLDR SDTGSSDGRS DDGSPNHPLA
STPFDSREGV EAEIESLEAD KESFEEVPMT GWPTDRVYSV FFDAVDYDER VVVIMLDEID
KLVEKSGDDT LYNLSRMNSE LENSRVSIIG ISNDLKFTDF LDPRVKSSLG EEEIVFPPYD
ANQLRDILEH RSEVAFKGGA LSEDVIPLCA AFAAQEHGDA RRALDLLRTA GELAERSQAE
TIVEEHVREA QDKIELDRVV EVVRTLPTQS KLVLFAIILL EKNGVHSINT GEVFNIYKRL
CEEIDADVLT QRRVTDLISE LDMLGIVNAV VVSKGRYGRT KEISLSVPLE ETEAVLLSDS
RLSDIDDVQP FVQARFEN