| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_5782 |
|---|
| Symbol | |
|---|
| ID | 8736258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 6185296 |
|---|
| End bp | 6188220 |
|---|
| Gene Length | 2925 bp |
|---|
| Protein Length | 974 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 646506409 |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003397558 |
|---|
| Protein GI | 284047218 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3899] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.239906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.713448 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCTCGA ATGAGGCCCG CGGGGGGGTC GACGAGGGCC CACCCACCCC ACCCACACCC
GCGCCACGGC GGCGCGCGGG CGTCCACGCG CTCGACGACG ACCCGCTGGA GCGCGATGCC
GAGATCGAGG CGGTGCGCGA AGCGATCGAC GCCGCCTGCG CGAACGACGG CCGCATCCTC
TTCCTCGAAG GCGCCGCCGG GCTCGGAAAG ACGCACCTGA TGACGCTCGC CACGCGCGCG
GCGCAGCAGC AGGGGATGGT GGTGCTGCGG GCGCGCGGAG GCGAGCTGGA GCGGCAGTAC
CCGTTCGGCG TCGCGCTGCA GCTGTACGAG CCGTACCTGT CATCGGTCTC GCCGCGCGAG
CGGCGGCGGG TGCTGGCCGG CGCCGCCGCC CACGCCGAGC CCGCGCTGTC AGGCCGCGTG
CGGATGCAGG AGGCCTCCGG CCCGCCCGAG TTCCCGCTGC TGCACGGGCT CCACTGGATC
GCGGCGAACA TCGCCGAGCA CCGCCCGCTG CTGATCGCCG TCGACGACGC GCACACCGCC
GACGACGCCT CGATGCGCGC GCTGCTCTAC ACCGCGCAGC GCAGCGAGGA CCTGCCGCTG
CTGATCGTCG TGACCGCGCG CCCGCGTCCG ACCGACGACG ACAGCGGCGA CGCGCTGGCG
GCGCTGGCGA CGCATCCGCT CGTGCGGCGG CTGCAACTGG TCCCGCTCAG CCGAGCGGCG
ATCGCCACGA TCGTGCGCGC CGCGCTGCCC GCCGCCGACG ACGCCTTCTG CGACGCCTGC
TGGCGCGTGA CCGGCGGCAA CCCCTTCTTC GCGCGCGAGC TGCTGGCGGA GCTGTCCAGC
TCGGCGATCG AGCCGACCGC CGCCAACGCC GAGGCGGTCG CCGGCCTCGG GCCGACGACG
ATCGCGCGGG CGACCGCCGG CCGGCTCGAG CGGCTGGCGC CGGGAGCGGC GCCGCTCGCG
CGCGCCGTCG CCGTGCTCGG CGACGCCGCG CCGCTGACGC AGGCGGCCGC GCTCGCCGGC
ATCAGCCCTC CGCAGGCGCG CGCCGCCGCG GATCAGCTCG CCGCCGCCGA CGTGCTGCGG
CCCGCCGGCG ACCTCGGCTT CGTGCACCCG ATCGTCCGCC AGGCGGTCTA TCTCGGGATC
CCCGGCGCCG AGCGCGCGCA GCTGCACCTC GACGCCGCGC AGCTGCTGCG CCGCGACGGC
GAGAACGGCG TCGACCGCGC CGCCGCGCAC CTGCTGCACA CGCTGCCGAC CGGGGAGGCG
TGGATCGTCG ACTGCCTCCA CGCTGCCGGC CGCCGCGCGC TCGCCGGCGG CTCCCCCGCG
ACCGCCGCGC GGCTGCTGCT GCGCGCGCTC GACGAGGCGC CGCCGAGCGG CGTGCGCGCC
GAGCTGCTGA TCGACCTCGG CCGCGCCGAC GCGCTCGCCG GGCGTCCGAC CGGACCCGAC
CGGCTGCGCG AGGCGGTCGC GCTGCTGGAG CAGCCGGAGG CGCGCGCCCG CGCGCTCGGG
CAGCTCGGCC AGGCGCTCTA CGCGGCCGGC GACAACGACG GCGCCGCGGC CGCCTTCGAC
GAGGGCCTGC GCGTGCTCGA CGGCGCCGAC CCTGTGCTGG AGGAGGAGCT GACCGCGGGC
TACCTGAGCG CCGCCCGGCT CGACTTCCGC AGACGCGAGG CGGCGCTGAC GCGCTTCAAG
GACCTGCTGT CCGGGTCGAG CGAGGCGACC ACGCCGGCGC AGCGCGAGCT GCTCGCGCAA
CGCGCGACCG AGCACGCGAT GCTCGGCACC TCGACCGCCG AGGAGGTGCG GACGCTGACC
CACCGCGCGC TCGGCGGCGA GCAGATGCTG CGGGAGGTGA CCGCAGACGG CACCGCCTAC
GTCGCCGCCG TCGCCGCGCT CTTCTTCGCC GGCTGGCTCG ACGACGTCGA GCTGACCGCC
ACGGCGGGGC TCGACGACGC GCGCACGCGC GGCTCGGTCG TCGGCTTCGC CGCGATGTCG
ACGTTGCGCG GGGCGGCTCG CTACCAGCGC GGCGACCTCG TCGGCGCGCT CGGCGACCTC
GAGGGCGGAC GCGAGCTGCT GCCGGTGATG ATGGTCGTGC GACCGTTCGC GCTCGGCTAC
ACGGCGCTCG CCCACCTCGA CCGCGGCGAG CCCGACGCGG CTGCGCGGCT GCTCGCCCAC
CCGCCCGAGG ACGACCTTCC CGAGCAGTTC ACCTACAACT GGATGCTGTG GGCGCGCGGC
CGCCTCGCGC TCGCCGCCGG CGACCCGGCC GCGGCGCTGG AGGACCTGCT CGAATGCGGC
CGGCGACAGG CCGCGATCCC GGCGCCGAAC CCGGCGATCG TGCCGTGGCG CTCGGAAGCA
GCGATCGCGG CGCTCAAGCT CAACCGCGCC GAGCAGGCGC ACGAGCTCGC GCACGAGGAG
CTGCGGCGCG CCCGCGCGTT CGGCTCCGCG CGGGCGCTCG GCACGGCGCT GCGCGCGGCC
GGCCTGGTCG CCGGCGGCAC GCCGGGGATC GCGCTGCTGG AGGAGTCGGT CGACGTGCTC
GAGCAGTCGC CGGCCGCGCT GGAGTCGGCG CGCTCGCTCG TCGACCTCGG CGCCGCGCGC
CGCCGCGCCC GCCAGCAGAC GGCCGCGCGC GAGACGCTGC GGCTCGGGCT CGACGCGGCG
TACCGCTGCG GCGCGGCGGG TCTCGCCGCG CAGGCGCGCG CGGAGCTGGT CGCGGCCGGC
GCACGGCCGC GCCGACCGGC GCTCAGCGGC GTCCACGCGC TGACGCCGAG CGAGCGGCGC
GTCAGCGAGC TGGCCGCGAA CGGACTGACC AACCGCGAGA TCGCGCAGGC GCTGTTCGTC
TCGACCAAGA CGGTCGAGTT CCACCTCCGC AACGCGTACC TGAAGCTGCG GATCCGCTCG
CGCGGCCAGC TGGCCGCGGC GCTCGCCGGC GCGGAGCCGG CGTAG
|
|---|
| Protein sequence | MSSNEARGGV DEGPPTPPTP APRRRAGVHA LDDDPLERDA EIEAVREAID AACANDGRIL
FLEGAAGLGK THLMTLATRA AQQQGMVVLR ARGGELERQY PFGVALQLYE PYLSSVSPRE
RRRVLAGAAA HAEPALSGRV RMQEASGPPE FPLLHGLHWI AANIAEHRPL LIAVDDAHTA
DDASMRALLY TAQRSEDLPL LIVVTARPRP TDDDSGDALA ALATHPLVRR LQLVPLSRAA
IATIVRAALP AADDAFCDAC WRVTGGNPFF ARELLAELSS SAIEPTAANA EAVAGLGPTT
IARATAGRLE RLAPGAAPLA RAVAVLGDAA PLTQAAALAG ISPPQARAAA DQLAAADVLR
PAGDLGFVHP IVRQAVYLGI PGAERAQLHL DAAQLLRRDG ENGVDRAAAH LLHTLPTGEA
WIVDCLHAAG RRALAGGSPA TAARLLLRAL DEAPPSGVRA ELLIDLGRAD ALAGRPTGPD
RLREAVALLE QPEARARALG QLGQALYAAG DNDGAAAAFD EGLRVLDGAD PVLEEELTAG
YLSAARLDFR RREAALTRFK DLLSGSSEAT TPAQRELLAQ RATEHAMLGT STAEEVRTLT
HRALGGEQML REVTADGTAY VAAVAALFFA GWLDDVELTA TAGLDDARTR GSVVGFAAMS
TLRGAARYQR GDLVGALGDL EGGRELLPVM MVVRPFALGY TALAHLDRGE PDAAARLLAH
PPEDDLPEQF TYNWMLWARG RLALAAGDPA AALEDLLECG RRQAAIPAPN PAIVPWRSEA
AIAALKLNRA EQAHELAHEE LRRARAFGSA RALGTALRAA GLVAGGTPGI ALLEESVDVL
EQSPAALESA RSLVDLGAAR RRARQQTAAR ETLRLGLDAA YRCGAAGLAA QARAELVAAG
ARPRRPALSG VHALTPSERR VSELAANGLT NREIAQALFV STKTVEFHLR NAYLKLRIRS
RGQLAAALAG AEPA
|
|---|
| |