| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_5366 |
|---|
| Symbol | |
|---|
| ID | 8735840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 5741625 |
|---|
| End bp | 5742767 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646505995 |
|---|
| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
|---|
| Protein accession | YP_003397146 |
|---|
| Protein GI | 284046806 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
|---|
| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGGAGA AGGCTGCAGT TCTGTTGGCG GACGAGGCTC CGATCGCGGA GATGGAGGAG
TTTCGCCAAC TGATAGCCGA GGGTCAGGAA CGCGGATACC TGACGTTCGA GGAGATCGCC
ACCACGCTCG AAGAGGTGGA GGTCACGAAG GAACAGGTGC AGGAGCTGCA TGCGCACCTG
GAGGAGCACG GCATCGACGT GGTCGAGGCC GACGGCAAGC CGGCGGTCTC TGCGGCTGGC
GCCGCGGAGG GGGAACGGCC GGACACGCGC CGCAGCAGCG GCTCGGCGAA GCGCCCGGAG
ATCGACCTGA CGGTCGAGCC GAGTCTCGAC TCGCTCCGGC TCTACCTGCG TTCGATCGGC
AGAGTCAACC TGTTGACGGC CGAGCAGGAG GTCCACCTGG CGCAGCGCAT CGAGCGCGGC
GACATGCGGG CCAAGCAGCA GATGATCGAG GCGAACCTGC GCCTCGTCGT GTCGATCGCG
AAGGGGTATC TCGGACGAGG GCTCACGTTC CTCGACCTGA TCCAGGAGGG CTCGCTCGGG
CTCATCCGCG CGGTCGAGAA GTTCGACCAC CGTCGTGGCT TCAAGTTCTC GACGTACGCG
ACCTGGTGGA TCCGCCAGGC CGTGACGCGC GCGATCGCCG ACAAGGGCCG GACCATACGG
ATCCCGGTCC ACATGGTGGA GAAGCTCAAC AAGGTCGTGC ACGTCGAGCG CCAGCTCGTG
CAGTCGCTCG GCCGTGAGCC CACGCCGGAG GAGATCGCGG CGGAGCTCGA GTGCACGGTC
AGGGAAGTCC GGGACATCCT GCGGATGGCC CAGCAGCCCG TGTCGCTCGA GAAGCCGATC
GGCGAGGAGG AGGAGTCCGA GCTCGGCGAC TTCGTCGAGG ATCAGACGGC CGAGTCACCG
TTCGAGCTGG CGTCGGAGAA CCTGCGGCGC GACAACGTGC GGCGGGCGCT TCAGGCGCTC
CCGCAGCGCG AGCGCGAGGT GATCGAGATG CGCTTCGGCC TCGGGGGAGG CCGCCCGCGC
ACGCTGGAGG AGGTCGGTCG CGCGTTCAAC GTCACGCGCG AGCGCATCCG CCAGATCGAG
AACCACACGC TCAAGAAGCT CGAGGCGCTG CCCGAAGCAC AGCGCCTCCG CGACGCGTCC
TAG
|
|---|
| Protein sequence | MREKAAVLLA DEAPIAEMEE FRQLIAEGQE RGYLTFEEIA TTLEEVEVTK EQVQELHAHL
EEHGIDVVEA DGKPAVSAAG AAEGERPDTR RSSGSAKRPE IDLTVEPSLD SLRLYLRSIG
RVNLLTAEQE VHLAQRIERG DMRAKQQMIE ANLRLVVSIA KGYLGRGLTF LDLIQEGSLG
LIRAVEKFDH RRGFKFSTYA TWWIRQAVTR AIADKGRTIR IPVHMVEKLN KVVHVERQLV
QSLGREPTPE EIAAELECTV REVRDILRMA QQPVSLEKPI GEEEESELGD FVEDQTAESP
FELASENLRR DNVRRALQAL PQREREVIEM RFGLGGGRPR TLEEVGRAFN VTRERIRQIE
NHTLKKLEAL PEAQRLRDAS
|
|---|
| |