| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_5265 |
|---|
| Symbol | |
|---|
| ID | 8735734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 5626544 |
|---|
| End bp | 5627788 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646505890 |
|---|
| Product | cell envelope-related transcriptional attenuator |
|---|
| Protein accession | YP_003397046 |
|---|
| Protein GI | 284046706 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1316] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.534178 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAGC ACCGCGACGA CCCCGACGAA CGCGGCGATC AGCCGTCCTA CCGCGTCTAC
CGCGCGGGCG GCGACCGCTC GGCGAGCCGC TCCGCGAACG AGCCCGCCGG ACCCGCGGGC
ACGCCCGAAT ACTCCCGCTA CCGCTCCAAG CCGCGCAGCC TGCGCGAGCG GCTGCGGGGC
GAGGACGCCG GGCTCGACGG CCTCGCCGCG AGCGGCGGGC GCGGGGACGG GCGCGGCGGC
GGACCGGACG GACCGGGCCG CCGACGGGGA CTGCCGCGCC GACGGCGCGG CGGCGGCGGT
CGGCGCGGGA TCACGCCGGG CCGTGTCGTC AAGTGGATCG TGCTGGCGGT CGGCGCGTGG
CTGGCGCTCT CGCTCGTGCT GTTCCTCGTC AGCGCGCAGA TCCAGAAGGG CAAGGTCTCC
GACTCGGCGA AGGCGGCGCT GACCGACGCC GGCTACCCAC TCACGTCCGC CAACAACGTG
CTGATCCTCG GCTCCGACCA GCGCGAGTCC GGAACGAAGG AGCCGGGCGC GAACACGAGC
GGTCCGAGCC GTTCGGACAC GATCATGCTG TGGCGCGTCG GCGGCGGGAA GTCCGCCCGC
CTGTCGATCC CGCGCGACAC GATCGTCGAC ATCCCCGGCC ACGGCCTGAA CAAGATCAAC
GCCGCCTACG CGTTCGGCGG CGCGGCGCTG TCGATCGACA CGATCGAGCA GTACCTCGGC
GTGCCGATCA ACCATCTGAT CGAGGTCGAC TTCGAGAACT TCCCGAAGCT GATCGACGCG
CTCGGCGGGA TCACCGTCAA GACCGGCCGC GTCTGCTCCG ACATCAGCGG CGGCAAGGCG
AACGGCGGCT GGTCGCTGCG GCTCAGAGCC GGCGAGAACA AGCTCGACGG GGAGGACGCA
CTGGCGCTCG CCCGCACGCG CAAGAACAGC TGCAACCCGG CCGAGGACGA CCTCACGCGC
GCGAGACGGC AGCAGGACAT CCTCAGCGGG ATCAAGGACA AGGTCACCTC GCCGACGACG
TTCTTCCGGC TGCCGTGGGT CTCGTGGGCG GCGCCGAAGG CGATGAAGAC CGACATGGGC
GGCCCGACGC TGCTCGGCTT CTTCGGTGCG AGCGCGATCG GCGGCACGCC GCCCGTCAGC
GTGCTGAGAC CGTCCAGCTT CCAGACGCTG CCCGACGGCG GTTCCGGGCT CGTCGTCTCC
GACGCCGACA AGCAGGCGGC CGTGCGCGCC TTCATGGACG GCTGA
|
|---|
| Protein sequence | MPEHRDDPDE RGDQPSYRVY RAGGDRSASR SANEPAGPAG TPEYSRYRSK PRSLRERLRG
EDAGLDGLAA SGGRGDGRGG GPDGPGRRRG LPRRRRGGGG RRGITPGRVV KWIVLAVGAW
LALSLVLFLV SAQIQKGKVS DSAKAALTDA GYPLTSANNV LILGSDQRES GTKEPGANTS
GPSRSDTIML WRVGGGKSAR LSIPRDTIVD IPGHGLNKIN AAYAFGGAAL SIDTIEQYLG
VPINHLIEVD FENFPKLIDA LGGITVKTGR VCSDISGGKA NGGWSLRLRA GENKLDGEDA
LALARTRKNS CNPAEDDLTR ARRQQDILSG IKDKVTSPTT FFRLPWVSWA APKAMKTDMG
GPTLLGFFGA SAIGGTPPVS VLRPSSFQTL PDGGSGLVVS DADKQAAVRA FMDG
|
|---|
| |