| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_5241 |
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| Symbol | |
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| ID | 8735709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Conexibacter woesei DSM 14684 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013739 |
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| Strand | - |
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| Start bp | 5602228 |
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| End bp | 5605566 |
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| Gene Length | 3339 bp |
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| Protein Length | 1112 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646505865 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_003397022 |
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| Protein GI | 284046682 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCTC CGCTCCTCGC ATACGCTGCT GACGACCCTG CCACGACGAC GCTCGCGCGC
GACGGCGGCC GGGCGTTCGT GTCGCAGTCG CTGCGTCCGT TCGTCGTCGC GGCGCTGGCG
CAGCAGGATC CGGCGCGCCC GCTGCTCGTC GTAGCCGGCG ACGACCGCCA GGCGCGCGAC
CTTGCCGCAG ACATGCGCAC CTGGCTGCAG CCGCGGCCGG TCCGCTTCTA CCCCTCGCGC
GGCGTCGCCT ACGAGTCGCA CCTCGCGCCG CCCGCGCATC TCGTCGGCCT GCGCGTCGCG
GCGCTCGACG CGCTGATCGG CGAGCGCGGC GCGGCCGCCC CGGTCGTCGT CGTCTCCGCC
GTCGCGTTGT CCGAGAAGGT CCCGAACCCG GCGCTGCGCC CGCACGGCTT CACGCTCAGA
GTCGGCGAGC TGATGGACCT CGACGAGTCG GCCGAGGACC TCGTCGCGGC AGGCTACGAG
CGCGTCGACC AGGTCGAGGA CCGCGGCCAG TTCGCGATCC GCGGCGGGCT GCTCGACCTC
TACCCGGCGA CCGAGGACCG CGCCGTGCGC GTCGACCTGT TCGGGGACGA GATCGAGTCG
CTGCGGTGGT TCTCGACGTT CACGCAGCGC TCGCTCGGCG ACGCGGAGGA GGTCGAGGTG
TCGCCCGCCG CCGAGCTGGC CCCCGAGCAC CGCGAGCTGG CCGAGATCGC CGCGCTGGAG
GACGCCGACA ACCGGCCCGA CATCGCGGAG CTGCTGCCCG TCGGCGACTT CCACGCGATG
CTCGACCTCG TCCCCGACGC GGCTGTGATG ATCGCCGCCG AGGAGGAGAT CGCGCCGGCG
CTCAGGGACC ACTGGCAGGA CGTCTGCACC GCCTTCCACG ACACCGACGC GCACGACCTC
TACGTCGCGC CGGAGGCTGT CCAGGCGGCG CTCGGCGAGC GCGCGAGAAT CCACCTCTCC
TCGATCGACG GCGGGCAGCC GCTCGCGTTC CGCGGGCAGG CGGCGGACGT CGCCGCGCGC
GGCGTGAAGG AGGCCGAGCC GGAGTTGGAG AAGCTGGTGC GCTCCGGCTA CCGCACCGTC
GTCGCGTTCG GCCGCAGAGG CGAGGGCGAC CGCGCGGCCT ACAACCTCGG CCGCATGAAG
GTCCGCTGGG TCGACGGCGA CGCGCCGCGC GGCGCCGACC TCGCGTTCGT CGAGGCGCGC
CTGCGCGACG GCTTCATCGC GCCCGGCTTC AGACTCGCGG TGATCCCCGA GCACCGGCTG
TTCCACCGCC GCCCGGCGCG GACGGCGGGG ACCGGCACCG GCCGTCGCCG CGGCGCGCTG
CGCTCGTTCA CGGACCTGCG CACCGGCGAC ATCGTCGTCC ACGAGGACCA CGGCCTCGCG
CGCTTCGCCG GCTTCGACAC GAAGACGGTC GCCGGCGTCA CGCGCGACTA CCTGAACCTG
GAGTACGCCG GCAGCGACAA GGTCTTCATG CCGGTCGACC AGTTCGCCAA GATCTCGCGC
TACGTCGGCG CCGGCGGCGA CCACCCGCCG CTCTCCAAGC TCGGCGGCAG ACGCTGGGAC
ACGCTCAAGG CGCGCGCCCG CAGAGCGGCG CAGGAGATGG CCGGCGAGCT GCTCAACCTC
TACGCCGAGC GCAAGCGCCG CGCCGGTCAC GCGTTCCCGC CCGACAGCGA CTGGATGCGC
GAGTTCGAGG ACGCCTGGCC GTACCGCGAG ACGCCCGACC AGCGCGAGGC TATCGAGCAG
GTCAAGACCG ACATGGAGAC CGCGCGCCCG ATGGACCGCC TGATCTGCGG CGACGTCGGC
TACGGCAAGA CAGAGGTCGC GCTGCGGGCC GCCTTCAAGG CCGCCAACGA CGGCAGACAG
GTGATGGTGC TCGTCCCGAC GACGATCCTC GCCCAGCAGC ACTACGGCAC CTTCGCCGAG
CGGCTGAAGG ACTACCCCTT CACGATCGAG CACGTCTCTC GCTTCCGGCC GGCGGCGGAG
CAGAGAGCGG CGATCAGAGC GTTCACGGAG GGCTCCGTCG ACATACTGAT CGGCACCCAC
CGCCTGCTCT CGCGTGACGT CCGCCCGAGG GACCTCGGGC TGCTGATCGT CGACGAGGAG
CAGCGCTTCG GCGTCAAGCA GAAGGAGCTG CTGCGCCAGC TGAAGCTGAA GGTCGACGTG
ATCGCGATGT CGGCGACGCC GATCCCGCGC ACGCTGCAGA TGTCGATCGC CGGCATCCGC
GACATCTCCG TGATCGAGAC GCCGCCAGAG GGCCGCCGGC CGGTCAAGAC CTACGTCGGC
GAGTACGACG AGCAGCTGGT CAAGTCGGCG ATCGAGCGCG AGCGCTCGCG CGGCGGACAG
GCGTTCTTCC TCCACAACCG CGTCGAGACG ATCGACGAGA CGGCCGAGCG GCTGCGGGCG
CTGTGCCCGG AGGCGCGCTT CGAGGTCGCC CACGGCCAGC TCGACGAGAA GACGCTGGAG
GAGCGGATGC TGCGCTTCCT GCGCGGCGAG GCCGACGTGC TCGTCGCGAC CTCGATCATC
GAGTCCGGCA TCGACATCCC GCAGGCGAAC ACGCTGATGG TCGAGCGCGC GGACCTCTTC
GGCCTCTCCC AGCTCTACCA GATCCGCGGG CGCGTCGGTC GCAGCCGCGA GCGCGCCTAC
GCGTATCTGC TGTACCCGTC CGCCTCGGCG CTGACCGCCG ACGCCGCGCA GCGGCTCTCG
GCGCTGTCGG ACTACACCGA GCTCGGCGCC GGCTTCAAGG TCGCGATGCG CGACCTCGAG
ATCCGCGGCG CGGGCAACCT GCTCGGCGAC GAGCAGTCGG GCCACGTCGC CGCGCTCGGC
TTCGAGCTGT ACATGCAGAT GCTCGACGAG GCCGTCCAGG AGATGGGCGG CGAGGACGGC
ACCGAGGAGC TGGCCGAGCC GGTTCGGCTC GACGTCAACG TCGACGCGTA CGTGCCGGTC
GACTACATCC CGTACGAGCA GGCGAAGATC GACGTCCACC GCCGCATCGC CGGCGCGCGC
GAGGTCTCCG AGCTGCATGA GCTGCGCTCC GAGCTGGCCG ATCGATTCGG CGAGCCGCCC
GAGCCGCTGC GCAACCTGCT GCTGCTGCAG CAGGCGCGCA TCAAGCTCGG CGAGGCTGGG
GCGCGCGCGG TGAGCTTCCG AGGCGGTAGG CTCGCCGTGA CGCCGATCGA GCTCGACTCG
CGCCGTGCCA AGCGGATGCG CGAGGAGATC CCGGAGGCGT TGTACGAGTC GGGCAAGTCG
CAGCTGTCCG TGCGGGTGCC CGACGATCCG GCCGCCCGCT TCCCGGCGGT GGTCCGGGCG
GCCGACGTGC TGCTGGCCGT GACCCGCGAA GCGGCGTGA
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| Protein sequence | MLAPLLAYAA DDPATTTLAR DGGRAFVSQS LRPFVVAALA QQDPARPLLV VAGDDRQARD
LAADMRTWLQ PRPVRFYPSR GVAYESHLAP PAHLVGLRVA ALDALIGERG AAAPVVVVSA
VALSEKVPNP ALRPHGFTLR VGELMDLDES AEDLVAAGYE RVDQVEDRGQ FAIRGGLLDL
YPATEDRAVR VDLFGDEIES LRWFSTFTQR SLGDAEEVEV SPAAELAPEH RELAEIAALE
DADNRPDIAE LLPVGDFHAM LDLVPDAAVM IAAEEEIAPA LRDHWQDVCT AFHDTDAHDL
YVAPEAVQAA LGERARIHLS SIDGGQPLAF RGQAADVAAR GVKEAEPELE KLVRSGYRTV
VAFGRRGEGD RAAYNLGRMK VRWVDGDAPR GADLAFVEAR LRDGFIAPGF RLAVIPEHRL
FHRRPARTAG TGTGRRRGAL RSFTDLRTGD IVVHEDHGLA RFAGFDTKTV AGVTRDYLNL
EYAGSDKVFM PVDQFAKISR YVGAGGDHPP LSKLGGRRWD TLKARARRAA QEMAGELLNL
YAERKRRAGH AFPPDSDWMR EFEDAWPYRE TPDQREAIEQ VKTDMETARP MDRLICGDVG
YGKTEVALRA AFKAANDGRQ VMVLVPTTIL AQQHYGTFAE RLKDYPFTIE HVSRFRPAAE
QRAAIRAFTE GSVDILIGTH RLLSRDVRPR DLGLLIVDEE QRFGVKQKEL LRQLKLKVDV
IAMSATPIPR TLQMSIAGIR DISVIETPPE GRRPVKTYVG EYDEQLVKSA IERERSRGGQ
AFFLHNRVET IDETAERLRA LCPEARFEVA HGQLDEKTLE ERMLRFLRGE ADVLVATSII
ESGIDIPQAN TLMVERADLF GLSQLYQIRG RVGRSRERAY AYLLYPSASA LTADAAQRLS
ALSDYTELGA GFKVAMRDLE IRGAGNLLGD EQSGHVAALG FELYMQMLDE AVQEMGGEDG
TEELAEPVRL DVNVDAYVPV DYIPYEQAKI DVHRRIAGAR EVSELHELRS ELADRFGEPP
EPLRNLLLLQ QARIKLGEAG ARAVSFRGGR LAVTPIELDS RRAKRMREEI PEALYESGKS
QLSVRVPDDP AARFPAVVRA ADVLLAVTRE AA
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