| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_4981 |
|---|
| Symbol | |
|---|
| ID | 8735447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 5310438 |
|---|
| End bp | 5311994 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 646505608 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003396767 |
|---|
| Protein GI | 284046427 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.547375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCACG CTCCGGCCCA CCCCGACCAC GACGCTCACG GCCACCATGG CCCGCCACCG
CCGCGCCGTT CGTGGACGCT GCTCGCGCTG CTGTGCGCGG CGCAGTTCAT GGTCATCCTC
GACGTCACCG TCGTGAACGT CGCGCTGCCG AGCATCGGCA GCGACCTCGG CTTCGCTCCC
GCCGACCTGC AATGGGTCAT CACCGCCTAC GTGCTGTTCA CCGGCGGCCT GATGCTGCTC
GGCGGCCGCG CCGCCGACGT GCTCGGCCGG CGCCCCGTCT TCCTCGCCGG CCTCGTCGTC
TTCACGGCCG CGTCGCTCGC CAGCGGCCTC GCGCCGACGG CCGATGTGCT CGTCGTCGCG
CGGGCCGTGC AGGGCGTCGG CGCGGCCCTG CTCGTGCCGG CCGCGCTGGC GCTCGTGACG
ACCGCCTACG ACGGCCACCA GCGCGCGGTC GCGCTCGGCG TCTGGGGCGC GATCGGCAGC
GCCGGCGCCG CCGTCGGCGT GCTCGTCGGC GGCGTGCTGA CCTCGGCGCT GAGCTGGGAG
TGGGTCTTCT ACGTCAACGT CCCGATCGGG ATCGGCGCCG GCCTCGGCGT CGCCGCGCTC
GTGCCGGCGC GAGCCGCCCC AGACTCGCAC GGCGCCGCGG ACTCGCACGG CGCCGCGGAC
TCGCACGGCG CTGCGGCCGA GGGGCCGAGC CACGCGCCGA GCGTCGCCGC CGCGCCGAGC
GCCGCCGCCT CGCGCTCGCG CGGCCGGCTC GACGTCGCCG GCGCGCTGAC CGTGATGGCC
GGGCTCGTGC TCGTCGTGCT GGGGCTCGAC GGCGCCGCCG AGCACGGTTG GGGCTCGCTG
CGCACGCTCG GCCTGCTCGG CGGCGGCGCG CTGCTGCTGG CCGCCTTCGC CGCCGTCGAG
CGGAGCGCCG CCGCTCCGCT CGTGCCGCCC GCGACCTGGC GCGAGCGGCC GCTCGTCGCG
AGCGCGGCGG TGATGCTCGG TGCGACCGGC ATCCTCGTCG GCGCGTTCTT CCTCAACACG
CTCTACCTGC AGGAGGTGCT CGGCGCGAGC GCACTGGAGA CCGGGCTCGC GTTCCTGCCG
CTCGCGCTCG TGATCCTGGC CGGCGCCCAC GCCGCGTCGC GGCTGCTGCC GCACGCCGGC
TCGCGCACGG TCGCGGTCGG CGGGCTCGTG CTCGTCACGG CCGGTGCGCT GCTGCTCGCC
GCGGCGCCGC CGCGCGCCGC CTACGGCAGC GACCTGCTGC CGGGGCTGCT GCTGCTCGGC
GCCGGCGTCG GGCTCGCGTT CGTCGCGGTC TCGGTGACGG CGATGGCGGA GGTCCGCCAC
GAGCAGGCCG GGCTCGCCTC GGGGCTGATG ACGACCGCCC ACGAGCTCGG CGCCGCGCTC
GGCGTCGCGG TCCTCTCCGC CGTCGCCGCC GGCGCGCTGG CGGACGGCGA CCCGGCCGCC
GGCTACGGCG ATGGCTTCCT CGCCGCCGGC CTGATCGCGG CCGCGCTCAC CGTCGTCGCG
CTCGTCGCGC TCCCGGCCGT GCGGCCCGCG CCGGGCGCAC GCGCCGCGAT GCACTGA
|
|---|
| Protein sequence | MHHAPAHPDH DAHGHHGPPP PRRSWTLLAL LCAAQFMVIL DVTVVNVALP SIGSDLGFAP
ADLQWVITAY VLFTGGLMLL GGRAADVLGR RPVFLAGLVV FTAASLASGL APTADVLVVA
RAVQGVGAAL LVPAALALVT TAYDGHQRAV ALGVWGAIGS AGAAVGVLVG GVLTSALSWE
WVFYVNVPIG IGAGLGVAAL VPARAAPDSH GAADSHGAAD SHGAAAEGPS HAPSVAAAPS
AAASRSRGRL DVAGALTVMA GLVLVVLGLD GAAEHGWGSL RTLGLLGGGA LLLAAFAAVE
RSAAAPLVPP ATWRERPLVA SAAVMLGATG ILVGAFFLNT LYLQEVLGAS ALETGLAFLP
LALVILAGAH AASRLLPHAG SRTVAVGGLV LVTAGALLLA AAPPRAAYGS DLLPGLLLLG
AGVGLAFVAV SVTAMAEVRH EQAGLASGLM TTAHELGAAL GVAVLSAVAA GALADGDPAA
GYGDGFLAAG LIAAALTVVA LVALPAVRPA PGARAAMH
|
|---|
| |