Gene Cwoe_3664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_3664 
Symbol 
ID8734119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp3900187 
End bp3900975 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID646504286 
ProductRNA polymerase, sigma 28 subunit, FliA/WhiG 
Protein accessionYP_003395456 
Protein GI284045116 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.198533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTGGAAACCA ACGTCAAAGC GATCGAGCTC AAGGATCTCT GGCGCCGCTA CAAAGCGAGC 
GGCGACGGGC GTGCCCGTGA GCGACTGGTC GTAGCCTATT CACCGTTGGT GAAGTACGTC
GCGGGCCGCA TGGCCTCCGG CTTGCCCGCC CACGTGGAAG AGGCAGATCT CATCTCCTAT
GGACTGATCG GCCTGATCTC GGCGATCGAG CGTTTCGACC TCGGCCGCGA GATCAAGTTC
GAGACGTACG CGATCCCCCG CATCCGCGGC GCGATCATCG ACGAGCTGCG CTCGCTCGAC
TGGGTTCCCC GGTCGGTGCG CGCGAAGGCT CGCGAGATCG AGCGCGCCAA CGCGAAGCTG
GAGCACAAGC TGCAGCGCGC GCCGACGGAC GAGGAGATGG CGCACGAGCT CGACATGTCG
ATGGACGAGT TCCAGGACGC GCTGATCCAG ATCTCGAACT CGACGATCGC CGCGCTCGAC
GAGCTGTGGA CGGTCTCGGA CGCGAGCGGC GATCAGATAT CGCTGCTGGA CACGCTCCAG
GACCCGGACG CTCCGGACCC GGAGAAGATC GTCGACGCGA GCGAGCTGAA GGACCGGGTC
GCCGACGCGA TCGCGCGGCT GCCCGAGCGG GAGAAGCTCG TGATCGCCCT CTACTACTAC
GAGAACCTGA CGCTGCGGGA GATCGGAGAG GTGCTCGGCG TGACCGAGTC CCGCATCTCG
CAGCTGCACA CGAAGGCCGT CCTGCGCCTG CGCTCCAGGC TGCAGAACGA AGACGCCGAC
AACGGCTGA
 
Protein sequence
METNVKAIEL KDLWRRYKAS GDGRARERLV VAYSPLVKYV AGRMASGLPA HVEEADLISY 
GLIGLISAIE RFDLGREIKF ETYAIPRIRG AIIDELRSLD WVPRSVRAKA REIERANAKL
EHKLQRAPTD EEMAHELDMS MDEFQDALIQ ISNSTIAALD ELWTVSDASG DQISLLDTLQ
DPDAPDPEKI VDASELKDRV ADAIARLPER EKLVIALYYY ENLTLREIGE VLGVTESRIS
QLHTKAVLRL RSRLQNEDAD NG