| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_3578 |
|---|
| Symbol | |
|---|
| ID | 8734030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 3808500 |
|---|
| End bp | 3809951 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 646504198 |
|---|
| Product | isochorismate synthase |
|---|
| Protein accession | YP_003395371 |
|---|
| Protein GI | 284045031 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1169] Isochorismate synthase |
|---|
| TIGRFAM ID | [TIGR00543] isochorismate synthases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0501054 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.494303 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATCG GCACGCGCGC GCGGACCGGC AGCCACGAGT GGCTCGACCG GGCCGCGCGC
GAGCTGCTCG CGAGACGGGT GGAGGAGGCG GTCAGGCGCG CTCGCGCGCG CGGCGCCGCC
GGCGAGGTGC TGGCCGCCGT GACGGTGCAG GCGCGCGGCG TCGACCCGAG CGCCGTCGTC
GCCGCGTCGC GGCGCGACGG TGAGCCGTGG TTCGCGCTCG AGCAGCCCGA CCGCGACGCG
ACGGCGCTCG CGGCGCTCGG CTGCGTGCGC GCGGTCGAAG CGTCCGGCGC GGACCGCTTC
GCGGAGGTCG CGCGGACGTG GCGGGCGCTC GCGGCCGACG CGGTCGCCGA CCCGCCGGAC
GGCCCGGCGG GCGCCGGCCT GGTCGCCGTC GGCGGCTTCG CGTTCGCCCC GCACGGCGGC
GAGTCGCCGG CGTGGAGCGG CTTCGCGCCC GCGTCGCTGC ACGTCCCGCA GGTCGCGTTC
GCACGCCGCG GTGCCGACGT TCGGCTGACG GTCGCGGCGC TCGCGACGCC CGACGACACG
CCGGAAGGGC TGCTGGAGGG GATCGAGGAG CGGCTGGCGG GGCTGACGCG CGCCGACGCG
ATGCCGCTGC TGGACCCGGC GCCCGCGGGC AGGTACCGCG TCGTCAGCGC GATGCCGCCC
GAGCACTACG AGAGCGCGGT GCAGCGCGGC GTCGAGCGGA TCGCCGCGGG CGAGGTCGAG
AAGGTCGTGC TCGCCCGCGA GGTGCAGGTC CACGCGCCGG TCGCGCACGA TCCCGGCGCC
GTCTTCGGCG CGCTGCGGGA CGCCTTCCCC GGCTGCTTCG TCTATGCGGT CGGCCGTGGC
GCGGCGACGT TCGTCGGCGC GACGCCGGAG CTGCTGGTGC GGCGCGACGG CGAGCGCGCC
TCGACCGTCG CGCTCGCCGG CTCGACCCGC CGCAGCGCCG ATCCGGCGGT CGACGACCAT
CTCGGCGAGG CGCTGCTGCG CAGCGACAAG AACCGCTCCG AGCAGGCGAT CGTCACGCGC
CGGATCGCGC GCGCGCTGCG GCCGCACAGC GTCTGGGTGA CGGCGGCCCC CGAGCCGGTC
GTCGTCAAGG TGGCGAACAT CCAGCACCTC GCGACGCCGA TCCGCGCGCA GCTCTCGCGC
CCGCTCGGCG CGATCGCGCT GACCGAGCTG CTGCATCCGA CCCCCGCGGT CGGCGGCGAG
CCGTTCGCGA CCGCCGAGCG GCTGATCCCG CAGCTGGAGG GCTTCGACCG CGGCTGGTAC
GCCGGCCCCG TCGGCTGGAC GGACGCCAAC GGCGACGGCG AGCTGTGCGT CGCGCTGCGC
TGCGCGCTCC TACGCGGCCA GATCGCGCAC TGCTACGCCG GCGTCGGCGT CGTGCGCGAC
TCCGACCCCG CGGCCGAGCT GGCCGAGACG GAGGTCAAGC TGCAGGCGCT GCTGCCGGTT
CTCGCCGGTT GA
|
|---|
| Protein sequence | MRIGTRARTG SHEWLDRAAR ELLARRVEEA VRRARARGAA GEVLAAVTVQ ARGVDPSAVV
AASRRDGEPW FALEQPDRDA TALAALGCVR AVEASGADRF AEVARTWRAL AADAVADPPD
GPAGAGLVAV GGFAFAPHGG ESPAWSGFAP ASLHVPQVAF ARRGADVRLT VAALATPDDT
PEGLLEGIEE RLAGLTRADA MPLLDPAPAG RYRVVSAMPP EHYESAVQRG VERIAAGEVE
KVVLAREVQV HAPVAHDPGA VFGALRDAFP GCFVYAVGRG AATFVGATPE LLVRRDGERA
STVALAGSTR RSADPAVDDH LGEALLRSDK NRSEQAIVTR RIARALRPHS VWVTAAPEPV
VVKVANIQHL ATPIRAQLSR PLGAIALTEL LHPTPAVGGE PFATAERLIP QLEGFDRGWY
AGPVGWTDAN GDGELCVALR CALLRGQIAH CYAGVGVVRD SDPAAELAET EVKLQALLPV
LAG
|
|---|
| |