Gene Cwoe_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_3300 
Symbol 
ID8733749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp3509072 
End bp3510577 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content71% 
IMG OID646503917 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003395093 
Protein GI284044753 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.17007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAA CCTCCGCCCC GCCTCCGCCC CTGCGCGCCG CCGGCCGTGC AGGCGTGCCG 
TCCCACGTCT GGCCGATCGC GATCGTCGTG ATCCTCGGCA TGGTCATGTC GGTCCTCGAC
ACGACCATCG TCAACGTCGC GCTGCAGGAC CTGTCGGTCG AGCTGCACAC GTCGCTCGAC
GACATCCAAT GGGTCGTGAC CGGCTACATG CTCGCGCTCG CGGCCGTCAT CCCCGTCACC
GGCTGGGCCG CGTCGCGCTA CAGCGCCCGC CGCCTGTACA TCGTCTCGCT CGTCCTCTTC
ACGCTCGGCT CGCTGCTGTG CGGTCTCGCG TGGTCGTCGG GCTCGCTGAT CGCCGCGCGC
GTGCTGCAGG GGATCGGCGG CGGCATGCTC GCGCCGATCG GCCAGATGAT CCTCGTGAAG
GCCGCCGGCC CGAGGAACCT CCCGCGGATC ATGAGCGCGA TCGGCGTCCC GATCGTGCTC
GCGCCCGTCT TCGGCCCGAC GCTCGGCGGC CTGCTGATCG AGCACGCCGG CTGGGAGTGG
ATCTTCTTCA TCAACCTCCC CGTCGGCGTC GTCGCGGTTG CCGCGGCGGT CAAGCTGCTG
CCGCAGGACA GCGGCGACCG GGCCGCCGGG AGGCTCGACA CGCTCGGCCT CGCGCTCGTC
GCGAGCGGCC TCGTCGGCGT CACGTACGGC CTCGCGCAGA GCGGCGGCGC AGGGACCCTG
CTCGACTCCA GCGTGCTCGT CCCGTTCCTG CTCGGCGTCA TGCTGATCGC CGCGTTCGTG
TTGCGCTCGC TGCGGATTCC CAGACCGCTG CTCGACGTCC GCCTGTTCGC CAACAAGGCG
TTCGCGGCCG CCTCGCTGAC GACCTTCTGC CTCGGTGCGG CGCTGTTCGG CGCGATGATC
CTGATGCCGC TCTACTTCCA GACGGTGCGC GGCGAGGACG CCGTGCAGAC CGGCCTGCTG
CTGATCCCGC AGGGCGTCGG CGCGGCGATC GCGATGGGCT TCTCCGGCCG CGTCACCGAG
CGCCTCGGCG GCGGCCTGAC GGCGCTGATC GGCGGCGTGA TCACCGTCGT CGCGACGATC
CCGTTCGTGC TGCTCGGCGC CGAGACGTCG TTCGCGCTGA TCGCCGCGGC GATGATCTTC
CGCGGGTTCG GCATCGGCAT GTCGATGATG CCGTCGATGA CCGCCGCGTT CGCCGTCCTG
CGACCCGACC AGGTCAACCA CGCGACGCCG CAGCTCAACG TCGTGCAGCG CGTCGGCGGC
TCGATCGGCA CCGCGATCCT GTCGGTCGCG CTCGAGAGCC GCATCCGCGA CGCCGGCGCG
TCGGCGACGC CGGCCGCGCT CGCCGACGCG TTCGGCGAGA CGTACGTGAT CGTGCTCGTC
GTGACGCTCG TCGCGCTGCT GCCGACGCTC CTGCTCGCGA TCGTCGAGCG CCGCGCCAGA
GCACGCCATA CTGCCCACGA GGTGGGGATC GAGACGAGGA TCGAGCTGGA GGCCGAGACC
GTATGA
 
Protein sequence
MTRTSAPPPP LRAAGRAGVP SHVWPIAIVV ILGMVMSVLD TTIVNVALQD LSVELHTSLD 
DIQWVVTGYM LALAAVIPVT GWAASRYSAR RLYIVSLVLF TLGSLLCGLA WSSGSLIAAR
VLQGIGGGML APIGQMILVK AAGPRNLPRI MSAIGVPIVL APVFGPTLGG LLIEHAGWEW
IFFINLPVGV VAVAAAVKLL PQDSGDRAAG RLDTLGLALV ASGLVGVTYG LAQSGGAGTL
LDSSVLVPFL LGVMLIAAFV LRSLRIPRPL LDVRLFANKA FAAASLTTFC LGAALFGAMI
LMPLYFQTVR GEDAVQTGLL LIPQGVGAAI AMGFSGRVTE RLGGGLTALI GGVITVVATI
PFVLLGAETS FALIAAAMIF RGFGIGMSMM PSMTAAFAVL RPDQVNHATP QLNVVQRVGG
SIGTAILSVA LESRIRDAGA SATPAALADA FGETYVIVLV VTLVALLPTL LLAIVERRAR
ARHTAHEVGI ETRIELEAET V