Gene Cwoe_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_2462 
Symbol 
ID8732905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp2616785 
End bp2617813 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content76% 
IMG OID646503078 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003394260 
Protein GI284043920 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0745158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0117059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACA CCGATCTCGT CACGACCGCC TGCGCCGGCG ACGACGCGGC CTTCGCCGCG 
CTCGCGGGGC GCTACCGGCG CCAGCTCCAC GTCCACTGCT ACCGCATGCT CGGCTCGCTC
GAGGAGGCCG AGGACGCCGT CCAGGAGACG CTGCTGCGGG CGTGGCGCGG CCGCGCCGGC
TTCAGCGTCG ACGGCCGCTG GTCCTACCGC GCGTGGCTCT ACCGGATCGC GACGAACGTC
TGCCTGACCG CGCTCGCGCG CACGCCGCGG CGCGTGCTGC CCTCGCAGAT CGCGCCGGCG
CGTGGGCCGA GCGCGGCCGT GCTGCCGGCG GCCGAGCTGC CGTGGCTGCA GCCGTACCCG
GACGCGCTGC TCGACGAGCT GCCGTCCGGC GAGGCCGGGC CCGACGCGGT CGTGCTCGCG
CGCGAGACGA TCGAGCTGGC GTTCCTCGCG GCGATCCAGC TGCTGCCGCC GCGCCAGCGC
GCCGCGCTGA TCCTCCGCGA CGTGCTCGAC TGGTCGGCGA AGGACACCGC CGCGCTGCTC
GACGTCAGCG TCGCCGCCGC CAACAGCGCG CTGCAGCGTG CGCGGGCGGC GCTGCGGCGG
GAGCTGCCCG CCCACCGCAC CGCGTGGTCG CCGGCGGCGG CCCCCAGCAG CGAGGAGCGC
GTCGTCCTGC GGCGCTACAT GGAGGCGCAC GAGCGTGCCG ACGTCGACGC GATCGCACGG
CTGCTGCGCG AGGACGCGCG CGGGATGATG CCGCCGAGCC CGACCTGGTT CGACGGCCGC
GAGGCGATCG TCTCGGCGCT CGCGCGCAGC TTCGACCCGG CCTCCTCGCT CTACGTCGGC
GCGCTGCGGT TCGTTCCGAC GCGCGCCAAC AGCCAGCCGG CCGCCGCCTG CTACGCCCGC
CGTCGCGGCG CGGACGGATA CGCGGCGCTG TCGCTGGACG TGCTGTGCGT GCAGGACGGG
CTGATCGCCG AGATCGTCGG CTTCGGCCCG GAGCTGTTCC CGCGCTTCGG CCTCCCGGTG
ACGCTCTGA
 
Protein sequence
MDDTDLVTTA CAGDDAAFAA LAGRYRRQLH VHCYRMLGSL EEAEDAVQET LLRAWRGRAG 
FSVDGRWSYR AWLYRIATNV CLTALARTPR RVLPSQIAPA RGPSAAVLPA AELPWLQPYP
DALLDELPSG EAGPDAVVLA RETIELAFLA AIQLLPPRQR AALILRDVLD WSAKDTAALL
DVSVAAANSA LQRARAALRR ELPAHRTAWS PAAAPSSEER VVLRRYMEAH ERADVDAIAR
LLREDARGMM PPSPTWFDGR EAIVSALARS FDPASSLYVG ALRFVPTRAN SQPAAACYAR
RRGADGYAAL SLDVLCVQDG LIAEIVGFGP ELFPRFGLPV TL