| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_2006 |
|---|
| Symbol | |
|---|
| ID | 8732448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 2106662 |
|---|
| End bp | 2108524 |
|---|
| Gene Length | 1863 bp |
|---|
| Protein Length | 620 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646502624 |
|---|
| Product | GTP-binding protein TypA |
|---|
| Protein accession | YP_003393807 |
|---|
| Protein GI | 284043467 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.316141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.766438 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATTC GTTCAGATCT CCGCAACGTC GCGATCGTCG CCCACGTCGA CCACGGGAAG
ACGACGCTCG TCGACAAGCT CCTGTGGCAA TCGGGCGCGT TCCGCTCCAA CCAGGACGTC
GCAGAGCGCG TCATGGACTC GATGGACCTC GAGCGCGAGA AGGGCATCAC GATCCTCGCG
AAGAACACCG CCGTCCAGTA CGGCGACGTG AAGGTCAACA TCATCGACAC GCCCGGACAC
GCCGACTTCG GCGGCGAGGT GGAGCGCGGG CTGACGATGG TCGACGGCGT GCTGCTGCTC
GTCGACTCCT CCGAGGGGCC GCTGCCGCAG ACGCGCTTCG TGCTGCGCAA GGCACTCGCC
GCGCACCTGC CGGTGATCCT CGTGATCAAC AAGGTCGACC GGCCGGACTC GCGCATCAAG
GAGGTCGTGG ACGAGGTCTA CGAGCTGTTC CTCGACCTCG ACGCGGACGA GTCCCAGATC
GAGTTCCCGA TCGTCTACAC GAACGCGAAG GACGGCTGGG CGTCGACCGA TTTCGACCCG
GACAACCCGG TCGACGGCAG AGACCTGAGA CCGCTGCTGG ACCTGATCGT CGAGCACATC
CCGGCGCCGT CGTACGAGGA GGACCACCCG CTGCAGGCGC TGGTCACGAA CCTCGATGCC
TCGCCCTATC TGGGCCGGAT CGCGCTGGCG CGCGTGCGCC ACGGCGTCAT CAGACGCGGT
CAGCAGATCG CCTGGTGCCG CACGGACGGG TCGATAGAGA GAGTCAGAGT GACCGACCTC
TTCATCACCG AGGCGCTCGA CCGCGTCGAG GCGAGCGAGG CGGGGCCGGG GGAGATCATC
GCGATCGCGG GCCTGGCCGA GGTGACGATC GGCGAGACGC TCGCCGACGC CGAGGACCCG
CGCCCGCTGC CGGTGATCCA CGTCGACGAC CCGTCGCTGT CGGTGACGAT CGGCGTCAAC
AACTCGCCGC TGGCGGCGGT CGAGAAGGGC ACGAAGGTGA CGGCGCGGCT GATCAAGGGC
CGGCTCGACA GCGAGCTGGT CGGCAACGTC TCGCTGCGCG TGCTGCCGAC CGAGCGGCCG
GACACCTGGG AGGTCCAGGG GCGCGGCGAG CTGCAGCTGG CCGTCCTCGT CGAGCTGATG
CGCCGCGAGG GCTACGAGCT GACCGTCGGC AAGCCGCAGG TCGTCACGAA GGAGATCGAC
GGCAAGCTGT GCGAGCCGAT GGAGCGGATG ACGATCGACA TCCCGGAGGA GTACGTCGGG
GTCGTGACCC AGCTGCTGGC GCTGCGCAAG GGGCGCATGG AGCAGATGAT CAACCACGGC
ACGGGCTGGG TCCGGATGGA CTACCTGGTG CCGGCGCGCG GGCTGATCGG CTTCCGCACG
GAGTTCCTGA CGGAGACGCG CGGGACGGGG ATCATCAACC ACGTCTTCGA CGGCTGGGAG
CCGTGGCACG GCGAGATCCG CACGCGGCCG TCCGGCTCGC TGGTCGCCGA TCGCGCCGGC
AGAGTCGCGT CGTTCGCGCT GTTCGGCCTG CAGGAGCGCG GGACGATGTT CGTCGGGCCG
GGCGTCGAGG TCTACGAGGG CATGATCGTC GGCGAGAACG CGCGCTCGGA GGACCTGGAC
GTCAACGCCG TGCGCGAGAA GAAGCTCAAC AACATCCGCT CCTCGACCGC TGACGAGCTG
GAGCGGCTCG TGCCCGCGAA GATCCTGTCG CTGGATCAGG CGCTCGAGTT CGTGCGCGAG
GACGAGTGCG TCGAGGTGAC GCCGGGCGCG GTGCGGATGC GCAAGGTCTA CCTGGACCAG
ACGACGCGCC AGAAGATGGC CCGCGGTCGC GCGCGCGACC GCCTCTCCAG CGTCGAGTCC
TAG
|
|---|
| Protein sequence | MAIRSDLRNV AIVAHVDHGK TTLVDKLLWQ SGAFRSNQDV AERVMDSMDL EREKGITILA
KNTAVQYGDV KVNIIDTPGH ADFGGEVERG LTMVDGVLLL VDSSEGPLPQ TRFVLRKALA
AHLPVILVIN KVDRPDSRIK EVVDEVYELF LDLDADESQI EFPIVYTNAK DGWASTDFDP
DNPVDGRDLR PLLDLIVEHI PAPSYEEDHP LQALVTNLDA SPYLGRIALA RVRHGVIRRG
QQIAWCRTDG SIERVRVTDL FITEALDRVE ASEAGPGEII AIAGLAEVTI GETLADAEDP
RPLPVIHVDD PSLSVTIGVN NSPLAAVEKG TKVTARLIKG RLDSELVGNV SLRVLPTERP
DTWEVQGRGE LQLAVLVELM RREGYELTVG KPQVVTKEID GKLCEPMERM TIDIPEEYVG
VVTQLLALRK GRMEQMINHG TGWVRMDYLV PARGLIGFRT EFLTETRGTG IINHVFDGWE
PWHGEIRTRP SGSLVADRAG RVASFALFGL QERGTMFVGP GVEVYEGMIV GENARSEDLD
VNAVREKKLN NIRSSTADEL ERLVPAKILS LDQALEFVRE DECVEVTPGA VRMRKVYLDQ
TTRQKMARGR ARDRLSSVES
|
|---|
| |