| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_1922 |
|---|
| Symbol | |
|---|
| ID | 8732363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 2017079 |
|---|
| End bp | 2019088 |
|---|
| Gene Length | 2010 bp |
|---|
| Protein Length | 669 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646502539 |
|---|
| Product | Endopygalactorunase-like protein |
|---|
| Protein accession | YP_003393723 |
|---|
| Protein GI | 284043383 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5434] Endopolygalacturonase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.449199 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCGGC TTCGACCATC TGCCCGTGCC GCGCTGCTGT GTTGCGCGGC GCTCGCGGCG
CTGCCCGCGC TCGCCGCCGC CAGAACGTAC GACGTCACCG CACCGCCGTA CTCGGCGGCC
GGCAACGGCA CGACGAACGA CCGCCTCGCG ATCCAGCAGG CGATCGAGGA CGCGTCGGCC
GCGGGCGGCG GGACGGTGCT GGTGCCCGCC GGGAGAACGT TCCTCTCAGG CGGCATCCGC
CTGCGCTCGA ACGTCACCTT CCAGCTCGAC GGGACGTTGC AGCAGAGCTT GAACACCGCC
CACTACGCGG TCGCGCCGAT GGTCGGCTGG GACGTGCCCG GCTCGACGCT CAACTGGGAC
TCGACGGCGT TTCACAACCA GCCGTTCGTG TTCGCCGCCG ACGCCGAGAA CGTCACGCTG
ACGACGTCGG GCAGAGGGAC GATCCAGATG GGCGTGACGC CGACCTCCGC AACCGCGATC
CGCGTCGACG CGATCGGCTT CCGCGACGTC GAGAGATGCT GGATCAACAA CATCACGACG
CGTGACGTGA TCGGCTTCAA CATCGTGCTC GACCGCGCGA ACCACTGCGA CATCACCGGC
ACGTACCTCA ACTCGAAGGC CGGCAGCCTC GGCAGCGACG GCATCAACAT CACGGGCTCC
CAGCACGTGA AGGTGCTCTA CAACCACGTC AGCGCGGGCG ACGACGGCCT CTACATCGCC
GTCAGCTACG GCGACCCGCG CTTCACCGGC CCGTGGCGGG CGCCCGACAC CGGCGGCGCC
GCGCGCTACA TCGAGATCGC GAACAACGAG GTCGTCGACT TCGGCCACCA GAACGCGTTC
ACGCTGATCC CGTGGGGCAG CCTCGACCCC GACCAGCGCA ACGTCGAGAT ATCCGACGTC
TCGATCCACG ACAACACCTT CATCGCGGAC GTCGCGCAGG CGGTCGACTG CCGCTGCGAC
AACCCCTGGA GAGGCACCAG AAGATACTTC CAGGACACCG ATCGCGGCGA CCAGTCGCCG
ATGACGCGCT TCTCGATGTG GAACAACGTC TTCATCTCGA GAACGAGAGT GCCGAACTTC
CCGACCTGGG TCGGGGCGAC CTTCACCGAC TCGCAGTTCG GCGGCCTCTC AGGTGCGCCC
GGGGCGATCA GAAGCAGTCC GTCGATCCAG AACGGCGGCT TCGAGCGGAC CGGCAGCGCG
TGGTGGAGCA TCGGCGGCGT CGGCGGCGCC ACGAACGACC CGGCGATGCT GCCGGCCGGC
GCGGGCGCGG CGCTCAGAGC ATTGGGCGGC TGGGCCGGGT TCGTGCTGCC GAGCGGCACC
GCCACGACAA GCCTCGTGCA GGGGCTCGGG TTGGAGAACG CCGCCGACCT CGGGCTCCCG
CTCGTCGGCG TCGCCGGCGC GGCGACATAC CGGCTCGACG CGACCGTCGT GACGAACGGG
CAGCCGTTCC GCGTCTACGC GCACGACACG TGCGAGAACA GAGTGCTCGC GCAGCAGACG
GTCTCCGCGA CGACGGCGAC GCGCGTGTCG CTCCCGTTCA GCGTCACCAG AAGCTGCGGC
AACGTCCATC TCGGGATCGA CCGGGGCGGA GCCACGAGCG GCTGGGCGCT GATCGACGAC
GTCGAGCTGC GCGCTCCCGT CGTCGGCAAC GAGGATCCGT CGCTGCGCAC GGTCGGCACG
TGGGGCCGCG ACTGGGCCGG CGGCGACATG GGCGGCACCC ACCACCATGA CAACGGCACC
GGCAGCACGG TGACGATCCC GTTCACCGGC ACGCGCGGCA GAGTCCTCGC GCCGAAGGGG
CCGGGCTGGG GCATCGCGTC GGTCTCGGTC GACGGCGGGC CGGCGGTCGA CGTCGACCTC
TACGGCGCCG CGGCCGCGTG GCACGCGACC GTCTTCGACA CCGGCGTCCT CCCGTTCGGG
AGACACACCG TCACGATGAC CGTCTCCGGC CGCAAGCACC CCTCGTCGAC CGGCACCTGG
ATCGCGTTCG ACGCGCTGCT CGTGAGCTGA
|
|---|
| Protein sequence | MHRLRPSARA ALLCCAALAA LPALAAARTY DVTAPPYSAA GNGTTNDRLA IQQAIEDASA
AGGGTVLVPA GRTFLSGGIR LRSNVTFQLD GTLQQSLNTA HYAVAPMVGW DVPGSTLNWD
STAFHNQPFV FAADAENVTL TTSGRGTIQM GVTPTSATAI RVDAIGFRDV ERCWINNITT
RDVIGFNIVL DRANHCDITG TYLNSKAGSL GSDGINITGS QHVKVLYNHV SAGDDGLYIA
VSYGDPRFTG PWRAPDTGGA ARYIEIANNE VVDFGHQNAF TLIPWGSLDP DQRNVEISDV
SIHDNTFIAD VAQAVDCRCD NPWRGTRRYF QDTDRGDQSP MTRFSMWNNV FISRTRVPNF
PTWVGATFTD SQFGGLSGAP GAIRSSPSIQ NGGFERTGSA WWSIGGVGGA TNDPAMLPAG
AGAALRALGG WAGFVLPSGT ATTSLVQGLG LENAADLGLP LVGVAGAATY RLDATVVTNG
QPFRVYAHDT CENRVLAQQT VSATTATRVS LPFSVTRSCG NVHLGIDRGG ATSGWALIDD
VELRAPVVGN EDPSLRTVGT WGRDWAGGDM GGTHHHDNGT GSTVTIPFTG TRGRVLAPKG
PGWGIASVSV DGGPAVDVDL YGAAAAWHAT VFDTGVLPFG RHTVTMTVSG RKHPSSTGTW
IAFDALLVS
|
|---|
| |