Gene Cwoe_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_1872 
Symbol 
ID8732313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp1967134 
End bp1968438 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content73% 
IMG OID646502489 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_003393673 
Protein GI284043333 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00541383 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGACGGTCG TGCCTCAACG CCGGGCGCGG AGCGGGGGAC CGCTCGCGCT CTTCGTGACG 
CTGCGCGCGC TCGCGCTGGC CGTCGCCGCG CTTACGACTG CCGCCGCGCT CGCGACGCTC
GCCGCGCTGC CCGCCGCCGC GCAGGCGAAG CTGCCGGCGC CGCCGAAGCT GTCCGCGCCG
GCCGCCGCCG TCTTCGAGGT CTCCAGCGGC CAGCCGCTCT ACGGCGTCGA CGCCGGCGAC
CGCCGGCTGA TCGCGAGCAC GACGAAGATC ATGACCGCGC TCGTCGCCGT TGAGAAGCTG
CCGCTCGGCC GCGTCTGCAC CGCGCCCGCA TACGCCGCCA CGCCTGCCGA GACGCAGATC
GGGCTGCGCC AGGGCGAGCG GATGAGCGTC CGCGACCTGC TGCGCGCGCT GATGCTGCCG
AGCGCGAACG ACGCCGCCGC GACGCTCGCG GTCTGCGCGG CCGGCTCGCG CGGCGCCTTC
ATCGACCTGA TGAACGCGAA GGCGCGCGAG CTGAGACTCG CCGACACCCA CTTCGCGACG
CCGGTCGGGC TCGACTCGCC GGCCAACTAC TCGACCGCCG CCGACCTCGC GCGGCTCGGC
ATCGCGCTGC GCCAGAAGCC GTTCCTGGCG CGCACGGTCG ACCTCAGATC GGCGGTCCTG
CGGACCGGCG CGTTCCCACG CACCGTCGTC AACCGCAACG GCCTCGTCCA GAGCGTGCCG
TGGGTCGACG GCGTCAAGAC CGGTCACACC AACGCGGCCG GCTACCTGTT GGTCGCGTCG
AGCACGCGCG ACGGCCTCTC GTTCGTCGCC GCCGTGATGG GCACGCCGAG CGAGAGCGCG
CGCGACGCCG ACGCGCTGGC GCTGCTGAGA TGGGCGTACG CGACGCACCG GATAGCGACG
CCGGTGAAGA GCGGCGCGGT CTTCGCGAGA GCGAAGCTCA AGTACCGGCC GGAGGACAAG
ATCGATCTGG TCGCGACGAG ATCGGTCAGA GAGCTGGTGC GGCGTGACCA GAGAGTCGTG
GTGGCGGTCA GAGCGCCTGA CGAGCTGCAG GGACCGCTGC CGAGAAACGC TGTTGTCGGC
TCGCTGACCG TACGCGCCGG CGGCAGAATC GTCGCCAGAG TGCCGCTCGT GACGAGAACG
GCGGTGCCCG AGGTCGGCAT CCTCGAACGG GCCGGGGACG CGGTTGCAAG ACCGGGTAGC
CTGATAGCGA TCGTGGTGAT CGTCGGGGGC GCGGCCGCGC TGCTGCTCCG CCGCCGCCAC
GGGACCCGGC GCCGTCGTGG CCGCGCGGAC ATGGAGGCAG CATGA
 
Protein sequence
MTVVPQRRAR SGGPLALFVT LRALALAVAA LTTAAALATL AALPAAAQAK LPAPPKLSAP 
AAAVFEVSSG QPLYGVDAGD RRLIASTTKI MTALVAVEKL PLGRVCTAPA YAATPAETQI
GLRQGERMSV RDLLRALMLP SANDAAATLA VCAAGSRGAF IDLMNAKARE LRLADTHFAT
PVGLDSPANY STAADLARLG IALRQKPFLA RTVDLRSAVL RTGAFPRTVV NRNGLVQSVP
WVDGVKTGHT NAAGYLLVAS STRDGLSFVA AVMGTPSESA RDADALALLR WAYATHRIAT
PVKSGAVFAR AKLKYRPEDK IDLVATRSVR ELVRRDQRVV VAVRAPDELQ GPLPRNAVVG
SLTVRAGGRI VARVPLVTRT AVPEVGILER AGDAVARPGS LIAIVVIVGG AAALLLRRRH
GTRRRRGRAD MEAA