| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_1617 |
|---|
| Symbol | |
|---|
| ID | 8732057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 1698629 |
|---|
| End bp | 1702198 |
|---|
| Gene Length | 3570 bp |
|---|
| Protein Length | 1189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646502235 |
|---|
| Product | homocysteine S-methyltransferase |
|---|
| Protein accession | YP_003393420 |
|---|
| Protein GI | 284043080 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGACT ACCTCGATGC CATCCGCAGC CGTGTCGTCG TCTTCGACGG GGGCATGGGC
GCCACGCTCG AGCAGTTCGA GCTGACCGAG AAGGACTATG GCGGACTCCA GGGCAAGTGC
CACGAGGCGC TGATCCTCCA CCGCCCCGAC GTGATCGAGG GCGTCCACAC GACGATGCTC
GACGCCGGCG CGGACGTCGT CGAGACCGAC ACGTTCCAGG CGTCGAGACT GAAGCTCGAG
GAGTGGGGCC TCGGCGAGCA CACGCTGGAG ATCAACCGCA GAGGCGCGGA GATCGCGCGC
AAGGCCGCCG GCGAGCACCG CTACGTCGCC GGCTCGATCG GCCCGACCGG CTTCCTCCCC
GCGTCCGACG ACCCGACGCT CGGCAACATC TCGTTCCGCG CGCTCGTCGA GGTCTTCGCC
GAGCAGGCGC AGGGCCTGAT CGAGGGCGGC GCCGACCTCC TGATGATCGA GACGGCGCAG
GACATCCTCG AGGTGAAGGC GTCGGTCTTC GGCGCGCGCG AGGCGTTCAA GACGACCGGC
CGGAAGATCC CGATCCAGGT CTCGGTGTCG CTGCTGCCCA ACGGCGGCAA GATGCTGCTC
GGCACCGACA TCTCCGCGGT CCTGACGACG CTGACCGCGC TCGACGTCGA CGCGCTCGGC
CTCAACTGCT CGACCGGCCC CGAGGACATG CGCGACGCGA TCCGCTTCCT CGGCGAGTTC
TCGCCCGTCC CCGTTCATTG CATCCCGAAC GCGGGCCTGC CGCTGCAGGG CCCCGACGGC
GAGACGATCT TCCCCGAGAA GCCCGAGCCG CTGGCGGCGT CGCTGACCGA ATTCGTCGAG
CGCTACGGCG TCTCGATCGT CGGCGGCTGC TGCGGCACGA CGGCGGCGCA CATCAGAGCG
ATCGCCGACT CTGTCAAGGG CCACCCCGTC GCGCCCCGGC CGGCCGCGCC CATTCCGCAC
GTCTCCTCGA TGATCGCCGC GACGCCGCTG GCGCAGGAGC CGCGCCCGAC GATCGTCGGC
GAGCGCGTCA ACTCGCAGGG CTCGCGCAAG GCGAAGGAGC TGCTGCTCGC CGACGACTAC
GACGGCCTGC TGCAGATCGC CGAGAACCAG GTCGAGCTCG GCGCCCACGT GCTCGACCTC
TGCGTCGCGC TGACCGAGCG CCAGGACGAA GACGTCCAGA TGCGCACGCT GGCCAAGCGC
GTCTCGCTCT CGCTTCCCGC CCCGATCCAG GTCGACTCGA CCGAGCCGGA GGTTATGGAG
GCGGCGCTGG AGCAGATCCC CGGCCGCGCG ATCGTCAACT CCGTCAACCT CGAGGCCGGC
CGCGACAAGC TCGACCGCGT CGTCCCGATC TGCCTCCAGC ACGGCGCCGC GCTGATCGCG
CTGACGATCG ACGAGGAGTC GATGGCGAAG ACGGCGCAGC GCAAGCTCGA CGTCGCCAAG
CGCATCCACG GCTATGTCTG CGACGAGCAC GGCATGGCGC CGGAGCTGCT GATCTTCGAC
GCGCTCACGT TCACGCTCGC GACCGGCTCA GACGAGTTCA AGACGTCCGC GGTCGAGACG
ATCGAGGGCA TCCGCCTGAT CAAGGCCGAG CTTCCCGGCG TGCTGACTTC GCTCGGCGTC
TCGAACGTCT CGTTCGGCTT CGGCAGAGCG GCGCGCGAGG TCCTCAACTC CGTCTTCCTG
CACCACTGCG TCGAGGCCGG CCTCGACCTC GCGATGGTGC ACCCGAAGGA CGTCACGCCC
TACTCGGAGA TCCCCGGGAA CGAGCGCGAG CTGGCCGACG ACCTCGTCTT CAACCGCCGC
GACGACGCGA CCCAGCGCTT CATCGAGCAC TTCGAGGAGA AGGGCGAGTC GGCCGAGGAC
GAGTCGGCCG ACCCGACCGC CGGGATGGAG CCCGAGGAGG CGCTCCACTT CCACATCCTG
CGCCGCAAGA AGGACGGCGT CGAGGACTGG ATCGACCGCT CCGTCGAGAA GATCGGCGCG
GTCCCCACGC TCAACGACGT GCTGCTGCCC GCGATGAAGG AGGTCGGCGA CAAGTTCGGC
GCCGGCGAGC TGATCCTCCC CTTCGTGCTG CAGAGCGCCG AGGTGATGAA GAAGGCCGTC
GCGCGGCTGG AGAACTACCT CGACCGGCTC GAGGGCTACA CGAAGGGCAC GGTCGTGCTC
GCGACCGTCT TCGGCGACGT CCACGACATC GGCAAGTCGC TCGTCAACAC GATCCTGACG
AACAACGGCT ACACGGTCGT CGACCTCGGC AAGCAGGTGC CGGTCTCGAC GATCCTCGAC
GCCGCGCAGG AGCACAGAGC GAACGCGATC GGCCTCTCCG CACTGCTCGT CTCGACGTCG
AAGCAGATGC CGCTCGCCGT CCAGGAGCTG CACCAGCGCG AGCTGCCGTA CCCCGTCCTG
ATCGGCGGCG CCGCGATCAA CCGCGACTTC GGCCTGCGGA TCCTCTACCC GCACGGCAGA
GAGTCCGACG ACGTCTACGA GCCCGGCGTC TTCTACTGCA AGGACGCGTT CGAGGGTCTC
GCGAAGATGG ACGAGATCGT CGACGACGAG GCCCGCTCGG CGCTGGTCGA GAAGACGCGC
GTGGCCGCCA AGAGACTGCG CGAGAAGGTC GTCGTCGTGG ACGACGGCCC GCCCGTCACC
GACGACTCCG TCCGCTCCGC CGCGCTGACC GACAACCCGG TCCCGACGCC GCCGTGGTGG
GGCGTGCGCG AGGTCGACGT GCCGCTCGAC GAGGTCTGGC ACCACCTCGA TACGCACGTC
CTCTTCAAGC TCCACTGGGG CGGGCGCGGC GTCAAGGGCG ACGCTTGGAC CGAGCTGCTG
CGGGACAACT TCCAGCCGCG CCTGGAGCGG ATGTGGCGCG AGCAGGACTA CCTGCACCCG
CGCGCGAAGC TCGGCTACTT CCCCTGCAAC AGCGAGGGGA ACGAGGTGAT CGTCTTCGAT
CCCGAGAACC CCGACAGAGA GCTGCACCGG CTCGTCTTCC CGCGCCAGCC CAAGCACGAC
CGCATCTGCC TCGCGGACCT CTACCGCCCG CTGGACAGCG GCGAGCGCGA CGTCGTCGCG
CTGCAGGTCG TGACCGCCGG CGACCAGGTG ACCGAGCTGA TGGCGCAGCT GGAGAGAGAC
GGCGAGTTCG CCGAGCAGCT GTTCGTCCAC GGCCTCGGCG TGCAGACGGC CGAGGGCATG
GCCGAGTGGC TGCACGCGAA GGTCCGCACC GACCTCGGCA TCGACCTCGA CGAGGGCCGC
CGCTACTCGT GGGGGTATCC CGCGTGCCCG GACCAGTCCG AGCACGAGAA GGTCTTCGAC
CTGCTCGACG CGCAGTCGAT CGGCATGCGC CTCTCCGGCG GCTACGCGGT CGAGCCGGAG
CAGTCGACGG TCGCGATCGT CGCGCATCAC CCGCAGGCCG TCTACTTCGG CATGAGAAGC
GGCTTCCTGC CGAAGGAGAA GGCGCCGGAC GACATCATCG CCGGCTCCGA CCGCGATCCC
GGCCTGCTCG ACGCCGGTTC GCTGGAGAGC GACCCGCGCG ACGGCGCGGT CGAGGAAGAG
GCGGCGCCGG ACGCCGCCGC GCGCTCCTAG
|
|---|
| Protein sequence | MRDYLDAIRS RVVVFDGGMG ATLEQFELTE KDYGGLQGKC HEALILHRPD VIEGVHTTML
DAGADVVETD TFQASRLKLE EWGLGEHTLE INRRGAEIAR KAAGEHRYVA GSIGPTGFLP
ASDDPTLGNI SFRALVEVFA EQAQGLIEGG ADLLMIETAQ DILEVKASVF GAREAFKTTG
RKIPIQVSVS LLPNGGKMLL GTDISAVLTT LTALDVDALG LNCSTGPEDM RDAIRFLGEF
SPVPVHCIPN AGLPLQGPDG ETIFPEKPEP LAASLTEFVE RYGVSIVGGC CGTTAAHIRA
IADSVKGHPV APRPAAPIPH VSSMIAATPL AQEPRPTIVG ERVNSQGSRK AKELLLADDY
DGLLQIAENQ VELGAHVLDL CVALTERQDE DVQMRTLAKR VSLSLPAPIQ VDSTEPEVME
AALEQIPGRA IVNSVNLEAG RDKLDRVVPI CLQHGAALIA LTIDEESMAK TAQRKLDVAK
RIHGYVCDEH GMAPELLIFD ALTFTLATGS DEFKTSAVET IEGIRLIKAE LPGVLTSLGV
SNVSFGFGRA AREVLNSVFL HHCVEAGLDL AMVHPKDVTP YSEIPGNERE LADDLVFNRR
DDATQRFIEH FEEKGESAED ESADPTAGME PEEALHFHIL RRKKDGVEDW IDRSVEKIGA
VPTLNDVLLP AMKEVGDKFG AGELILPFVL QSAEVMKKAV ARLENYLDRL EGYTKGTVVL
ATVFGDVHDI GKSLVNTILT NNGYTVVDLG KQVPVSTILD AAQEHRANAI GLSALLVSTS
KQMPLAVQEL HQRELPYPVL IGGAAINRDF GLRILYPHGR ESDDVYEPGV FYCKDAFEGL
AKMDEIVDDE ARSALVEKTR VAAKRLREKV VVVDDGPPVT DDSVRSAALT DNPVPTPPWW
GVREVDVPLD EVWHHLDTHV LFKLHWGGRG VKGDAWTELL RDNFQPRLER MWREQDYLHP
RAKLGYFPCN SEGNEVIVFD PENPDRELHR LVFPRQPKHD RICLADLYRP LDSGERDVVA
LQVVTAGDQV TELMAQLERD GEFAEQLFVH GLGVQTAEGM AEWLHAKVRT DLGIDLDEGR
RYSWGYPACP DQSEHEKVFD LLDAQSIGMR LSGGYAVEPE QSTVAIVAHH PQAVYFGMRS
GFLPKEKAPD DIIAGSDRDP GLLDAGSLES DPRDGAVEEE AAPDAAARS
|
|---|
| |