| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_0470 |
|---|
| Symbol | |
|---|
| ID | 8730898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 483790 |
|---|
| End bp | 486351 |
|---|
| Gene Length | 2562 bp |
|---|
| Protein Length | 853 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646501084 |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_003392281 |
|---|
| Protein GI | 284041941 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4581] Superfamily II RNA helicase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.191339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0991802 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGG TCGACGCCCT TCCCACCCAC CCCAGCGCCG ACACGCTCTA CGAAGCGTTC
ACCGACTGGG CGGCGCACGC GGGCCTGAAC CTCTACCCGC ACCAGGAGGA GGCGGCGATC
GAGCTGTTCA GCGACAACAA CGTCGTGCTC GCCACACCGA CCGGCTCGGG CAAGTCGATG
GTCGCGATCG CGGCGCACTT CGCCGCGCTG GCCGAGAACC GCGTCACGTT CTACACGGCG
CCGATCAAGG CGCTCGTGTC GGAGAAGTTC TTCGCGCTGT GCGAGACGTT CGGCGCCGAG
AACGTCGGGA TGCTGACCGG CGACGCGTCG GTCAATGCGA ACGCGCCGAT CATCTGCTGC
ACCGCGGAGG TGCTGGCGAA CATCGCGCTG CGGGAGGGCT CCGGCGCGGA CGTCGGGCAG
GTCGTGATGG ACGAGTTCCA CTACTACGCC GACGGCCAGC GCGGCTGGGC GTGGCAGGTG
CCGCTGCTGT GCCTGCCCCA AGCGCAGTTC CTGCTGATGT CGGCGACGCT CGGCGACGTC
AGCGCGATCG CCACCGACCT GACGCGCCGG ACCGGGCGCG AGACGGCGCT GATCGACGAC
GCCGAGCGGC CGGTCCCGCT CACCTACGCG TGGTCGGTCG AGCCGCTGCA CGAGCTGCTG
GAGGAGCTGG TCGCGGTCGA CCGCGCGCCG ATCTACGTCG TCCACTTCAC GCAGGCCTCC
GCGATGGAGC GCGCCCAGTC GCTGCTGTCG GCGAAGCTCT GCACGCGCGA GGAGCGCGAC
GCGATCGCCG AGGCGATCGG CGCCTTCCGC TTCACGGCCG GCTTCGGCCG CACGCTCTCC
AAGCTGGTCC GCGGCGGTGT CGGCGTCCAC CACGCCGGGA TGCTGCCGCG CTACCGGCGG
CTGGTCGAGC AGCTCGCGCA GACCGGGCTG CTGAAGGTGA TCTGCGGCAC CGACACGCTC
GGCGTCGGCA TCAACGTGCC GATCCGCACC GTCGTCTTCA CGGCGCTGGC GAAGTACGAC
GGCGCGCGGC ACCGGCTGCT GAAGGCGCGC GAGTTCCACC AGATCGCGGG GCGCGCCGGG
CGGGCCGGGT TCGACACCTC CGGCTACGTC GTGGTGCAGG CGCCCGAGCA CGTGATCGAG
CGCACGCGCG CGCTCGCGAA GGCCGGCGAC GACCCGAAGA AGCGCCGCAA GGTCCAGGTC
AAGAAGGCGC CGGAAGGCGC CGTCAGCTGG ACCGAGGAGA CGTACGAGCG GCTGAAGGGC
GCGGTCCCCG AGGCGCTCGT GTCGCGGATG CGGGTCGACC ACGCGATGAT CCTCAACGTC
GTCAACCAGC CGGCCGACCC GGTCGCGGCG ATGCGGGCGC TGATGGAGGA CAACCACGAG
GACGAGCGCG GCCGCCTGCG GCTCTCCGAG CAGGCCCGCG CGCTCGGTGA CGAGCTGGTC
GACGCCGGCG TCCTGGAGTG GCTGCCGGAG CCCGACCCGG ACGGCCGCAC GCTGCGACTC
GCGGTCGAGC TGCAGGAGAA CTTCGCGCTC AACCAGCCGC TCGCGTCGTT CGCGCTCGTC
GCGTTCGAGC TGCTCAACCC GGAGGCCGAG ACCTACGCGC TCGACGTGCT GTCGGTCGTC
GAGGCGATCC TCGACGACCC CTTCCCGGTG TTGATGGCGC AGGCGAACAA GGAGCGCGGC
GAGGCCGTCG CCGAGATGAA GGAGCAGGGG ATCGAGTACG AGGAGCGGAT GGAGCTGCTC
GAACAGGTCA CCTACCCGAA GCCGCTCGCC GAGCCGCTGG AGGACGCGCT GCGGACGTTC
CGTGAGACGC ACCCGTGGGT GCGCGAGTCC GACCTGTCGC CGAAGTCGGT CGTGCGCGAC
ATGCACGAGT GGGGGCGGAC CTTCACCGAG TTCGTCTCGC ACTACGGCCT GGCGCGCTCG
GAGGGGGTCG TGCTGCGCTA CCTCAGCAGC GCATACCGCG CGCTGCGCCA GACGGTCCCC
GAGCAGGTCC GGACCGAGGA GCTGGCCGAG ATCATCGAGT GGCTCGGCGA GACGATCCGG
CAGACCGACT CGAGCCTGCT GGACGAGTGG GAGGCACTGA CCGACCCGGA GTCGGTCGCG
CGCGCGTCCG CCGACCTGGC GGCCGGGAAG CCGCCGCCGC CGGCCCGGCC GATCACCGCC
AACACGCGCG CGTTCACGAA GATGGTCCGC AACGCGATGT TCCAGAAGGT CCGCCTGGCG
TCACAGGACC GTGCTGAGGA GCTGGCGCAG CTCGACGCCG CCGGGGCCGC GCTGACCGAC
CCGCCCGGGA AGATCGCGAT GCGGCTGGCC GCCTGGGAGG ACGCGCTCGA CGCCTACTGG
GCGGAGTACG ACGAGATCGG CTCAGGGCCG CGGGCGCGCT CGCCGGAGCT GCTGCTGATC
GACCGCGAGC CGCCCGGCGG CGGCCGCCGC TGGAGCGTAC GCCAGATCGT CGAGGACCCC
GACGACAACC GCGACGTCGC GATCGTCGCG GAGGTCGACC TCGACGCCTC CGACCACGCC
GGCGAGCCGG TGATCCGGAC GCTGTCGTTC GGACAGTCCT AG
|
|---|
| Protein sequence | MSLVDALPTH PSADTLYEAF TDWAAHAGLN LYPHQEEAAI ELFSDNNVVL ATPTGSGKSM
VAIAAHFAAL AENRVTFYTA PIKALVSEKF FALCETFGAE NVGMLTGDAS VNANAPIICC
TAEVLANIAL REGSGADVGQ VVMDEFHYYA DGQRGWAWQV PLLCLPQAQF LLMSATLGDV
SAIATDLTRR TGRETALIDD AERPVPLTYA WSVEPLHELL EELVAVDRAP IYVVHFTQAS
AMERAQSLLS AKLCTREERD AIAEAIGAFR FTAGFGRTLS KLVRGGVGVH HAGMLPRYRR
LVEQLAQTGL LKVICGTDTL GVGINVPIRT VVFTALAKYD GARHRLLKAR EFHQIAGRAG
RAGFDTSGYV VVQAPEHVIE RTRALAKAGD DPKKRRKVQV KKAPEGAVSW TEETYERLKG
AVPEALVSRM RVDHAMILNV VNQPADPVAA MRALMEDNHE DERGRLRLSE QARALGDELV
DAGVLEWLPE PDPDGRTLRL AVELQENFAL NQPLASFALV AFELLNPEAE TYALDVLSVV
EAILDDPFPV LMAQANKERG EAVAEMKEQG IEYEERMELL EQVTYPKPLA EPLEDALRTF
RETHPWVRES DLSPKSVVRD MHEWGRTFTE FVSHYGLARS EGVVLRYLSS AYRALRQTVP
EQVRTEELAE IIEWLGETIR QTDSSLLDEW EALTDPESVA RASADLAAGK PPPPARPITA
NTRAFTKMVR NAMFQKVRLA SQDRAEELAQ LDAAGAALTD PPGKIAMRLA AWEDALDAYW
AEYDEIGSGP RARSPELLLI DREPPGGGRR WSVRQIVEDP DDNRDVAIVA EVDLDASDHA
GEPVIRTLSF GQS
|
|---|
| |