| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_0040 |
|---|
| Symbol | |
|---|
| ID | 8730468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 40513 |
|---|
| End bp | 41130 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 646500654 |
|---|
| Product | Flagellar assembly protein FliH/Type III secretion system HrpE |
|---|
| Protein accession | YP_003391851 |
|---|
| Protein GI | 284041511 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.457372 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCTGATC CGGCGACGGC CGCTCCGTAC GCCTTCCGGC AGCTGGAGGA GCCGCGTCCG
GTCTCGCTGC GCGAGATCGA GGACCCGATC GCCAACGCTC ACGCGGAGGC CGAGCGGATC
CGCGAGGAGG CGCGCGCGCA GGGCTACGCC GACGGTCAGG CCGCGGCGCT CGCCGCCGCC
CAGCCGCCGC TGGAGGCGGC GCTCGCCGCG CTGCAGCAGG CGGTCGCCGG CGTCGAGCAG
GTGCGCGACG AGACGGCCGC GGCCGTCGAG CGCGACGCGA TCGAGCTGTC GCTGCAGCTG
GCGGAGAAGA TCGTCGCGGG CGCGCTCGCG GTCGAGTCCG AGCGGATCGT CGACGTCGTG
CGCGGCGCGC TGCGCCGCCT CGCCGAGCGC CGCCGCGTGA CGATCCTCGT CCACCCCGAC
GACCTCGAGA CGGTCCGCGC CGCGACCGAG TCGTTCGTCA CCGGCCTCGG CGGGATCGAG
CACTGCGAGG TCCAGGCCGA GCGGCGGATC ACGCCCGGCG GCGCGAGCGT GCGGACCGAG
GAGGGCCAGA TCGACGCGAC CGTCAGCACG CAGCTGATGC GCGCGCGAGA GCTGGTCGAG
CTGGAGTTGG GTGAGTAG
|
|---|
| Protein sequence | MSDPATAAPY AFRQLEEPRP VSLREIEDPI ANAHAEAERI REEARAQGYA DGQAAALAAA
QPPLEAALAA LQQAVAGVEQ VRDETAAAVE RDAIELSLQL AEKIVAGALA VESERIVDVV
RGALRRLAER RRVTILVHPD DLETVRAATE SFVTGLGGIE HCEVQAERRI TPGGASVRTE
EGQIDATVST QLMRARELVE LELGE
|
|---|
| |