Gene Cwoe_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_0029 
Symbol 
ID8730457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp30457 
End bp31269 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content68% 
IMG OID646500643 
ProductRNA polymerase, sigma 28 subunit, FliA/WhiG 
Protein accessionYP_003391840 
Protein GI284041500 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0705615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCG ACACGAGGCG TCACAACCGC ATCTCCGCAG AAGATGCGTT GGCGCTCTGG 
CGGCAGTACA AGGAGAGCGG CGACCGCGCG GTGCGCGACC GGCTCGTGCT CACCTTCGCC
CCGATGGTCA AGTACATCGT CTACAAGAAG GTCCGCGAGA TCCCCGCGCG CTGCGAGGTC
GAGGACTTCA TCTCCTGTGG GCTGGAGGCG CTGATCCACT CGATCGAGCG CTACGACCCG
GAAAAGGGCG CGACGCTGGA GCAGTTCTCC TGGACGCGCA TCCACGGCGC CGTGCTCGAC
GAGCTGCGCC GCCAGGACTG GGCCCCGCGC TCGCTGCGCC GCTGGGAGCG GGACATCAAC
CAGGCCCGCG AGCACTTCAT CGGCGTCCAC AGCCGGCGGC CCTCTCGTGA GGAGCTGGCA
GGGGCGCTTG GCACGACGCC AGCCGAGCTG CGTGCCCGCG AGGACGAGAT CGTCGCCTCC
GACGTCACCT CGCTCAACAC GCTCGTGCTC AGCGACGACG AGACGGCGAT CGAGCGGATC
GACACGCTCG TCAGCGAGGA CCGCTTCGCC GATCCCGAGC ACCACACCGC GCGCGACCAG
GCGAAGATGC GCTTCCGCGA GGCGTTCGAG CGGCTTCCCC GCCGCGAGCG CGAGGTCGCG
GTCCTGCTCT ACGTCAAGAA CCTGACGCTG CGTGAGATCG GCGGCATCCT CGGCGTCTCC
GAGAGCCGCG TCTGCCAGAT CCACGGCCAG CTCAAGCGGA TGCTGAAGGA AGAGCTGATC
GCCGACTCCG TCCTCTTCAG CGAGGTCGCG TAG
 
Protein sequence
MKLDTRRHNR ISAEDALALW RQYKESGDRA VRDRLVLTFA PMVKYIVYKK VREIPARCEV 
EDFISCGLEA LIHSIERYDP EKGATLEQFS WTRIHGAVLD ELRRQDWAPR SLRRWERDIN
QAREHFIGVH SRRPSREELA GALGTTPAEL RAREDEIVAS DVTSLNTLVL SDDETAIERI
DTLVSEDRFA DPEHHTARDQ AKMRFREAFE RLPRREREVA VLLYVKNLTL REIGGILGVS
ESRVCQIHGQ LKRMLKEELI ADSVLFSEVA