Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cwoe_0029 |
Symbol | |
ID | 8730457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Conexibacter woesei DSM 14684 |
Kingdom | Bacteria |
Replicon accession | NC_013739 |
Strand | - |
Start bp | 30457 |
End bp | 31269 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646500643 |
Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
Protein accession | YP_003391840 |
Protein GI | 284041500 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0705615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCG ACACGAGGCG TCACAACCGC ATCTCCGCAG AAGATGCGTT GGCGCTCTGG CGGCAGTACA AGGAGAGCGG CGACCGCGCG GTGCGCGACC GGCTCGTGCT CACCTTCGCC CCGATGGTCA AGTACATCGT CTACAAGAAG GTCCGCGAGA TCCCCGCGCG CTGCGAGGTC GAGGACTTCA TCTCCTGTGG GCTGGAGGCG CTGATCCACT CGATCGAGCG CTACGACCCG GAAAAGGGCG CGACGCTGGA GCAGTTCTCC TGGACGCGCA TCCACGGCGC CGTGCTCGAC GAGCTGCGCC GCCAGGACTG GGCCCCGCGC TCGCTGCGCC GCTGGGAGCG GGACATCAAC CAGGCCCGCG AGCACTTCAT CGGCGTCCAC AGCCGGCGGC CCTCTCGTGA GGAGCTGGCA GGGGCGCTTG GCACGACGCC AGCCGAGCTG CGTGCCCGCG AGGACGAGAT CGTCGCCTCC GACGTCACCT CGCTCAACAC GCTCGTGCTC AGCGACGACG AGACGGCGAT CGAGCGGATC GACACGCTCG TCAGCGAGGA CCGCTTCGCC GATCCCGAGC ACCACACCGC GCGCGACCAG GCGAAGATGC GCTTCCGCGA GGCGTTCGAG CGGCTTCCCC GCCGCGAGCG CGAGGTCGCG GTCCTGCTCT ACGTCAAGAA CCTGACGCTG CGTGAGATCG GCGGCATCCT CGGCGTCTCC GAGAGCCGCG TCTGCCAGAT CCACGGCCAG CTCAAGCGGA TGCTGAAGGA AGAGCTGATC GCCGACTCCG TCCTCTTCAG CGAGGTCGCG TAG
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Protein sequence | MKLDTRRHNR ISAEDALALW RQYKESGDRA VRDRLVLTFA PMVKYIVYKK VREIPARCEV EDFISCGLEA LIHSIERYDP EKGATLEQFS WTRIHGAVLD ELRRQDWAPR SLRRWERDIN QAREHFIGVH SRRPSREELA GALGTTPAEL RAREDEIVAS DVTSLNTLVL SDDETAIERI DTLVSEDRFA DPEHHTARDQ AKMRFREAFE RLPRREREVA VLLYVKNLTL REIGGILGVS ESRVCQIHGQ LKRMLKEELI ADSVLFSEVA
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