Gene Slin_6968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6968 
Symbol 
ID8716231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp140390 
End bp140833 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content57% 
IMG OID 
ProductUspA domain protein 
Protein accessionYP_003391711 
Protein GI284005892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.483791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.0402006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTC AAAACATACT CATGGCGGTT GATGCCAGTC CGTACTCCCT AAAATCGACG 
CAGGCTGGCT TTGATTTGGC CCGTTCCTGC GGGGCCGACG TAACGTTGAT CTACGTTATT
GACCCCGTAC TGGAAATGGG TAACATCGAC GGTGGTGAGT TTCCCGACCA GGCTCGTCAG
CGCGAACGGG CGGCCGGGCA AACGCTCCTG GATAACTTGA AACAAAGCGC GGGTTCGGGC
CTGACCGTTC AGACGCTGAT GCCCGAGGGC AAACCCGAGG AAACGATCCT GGCTGCGGTT
GAGGATGCAG GTGCCGATTT GCTGGTGATC GGCACTCATG ACCGGAGTGG ACTACTTCAC
CTGTTGCAGG GTAGTATGAC CGATTACGTC CTGCGGCACA GTAAGGTCCC GGTGCTGGTC
GTACCGACCC ATCTGCAGGA CTAA
 
Protein sequence
MAFQNILMAV DASPYSLKST QAGFDLARSC GADVTLIYVI DPVLEMGNID GGEFPDQARQ 
RERAAGQTLL DNLKQSAGSG LTVQTLMPEG KPEETILAAV EDAGADLLVI GTHDRSGLLH
LLQGSMTDYV LRHSKVPVLV VPTHLQD