Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6932 |
Symbol | |
ID | 8716196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013732 |
Strand | + |
Start bp | 106410 |
End bp | 107822 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | beta-lactamase domain protein |
Protein accession | YP_003391676 |
Protein GI | 284005857 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTG AGCAGATTTA TACCGGTTGC TTATCGCAGG GAACCTACTA TATCGAAAGC AACGGGGAAG CCGCTGTCAT TGATCCCTTA CGGGAGGTGG CTTCGTATTT GGAGAAAGCT CATAGCGATG GGGCGACGAT TAAGTATGTA TTTGAGACGC ACCTGCACGC TGATTTTGTG TCGGGTCATC TTGACTTAGC CCGCCAGGCA GGCGCACCAA TCATCTATGG CCCCAACGCA CAGACTGGCT TTGAATCCTA TAGTGCCCGC GCCGGAGAAG AGTTTCCACT GGGTGCGCTA ACAATTCAAG TACTGCATAC ACCGGGTCAT ACGATTGAAT CGAGCTGTTA TCTGCTCCTG GATGCGGACC GGCTGCCCAT CGCGCTTTTT AGTGGCGATA CCTTGTTTAT TGGCGATGTT GGGCGACCCG ACCTGGCGCA GGGATCCGCA TTGACCACGC TGGATTTAGC GGGCATGCTC TTCGATTCGC TTAGAACCCA GATTATGCCC TTACCGGACA ACGTAGTGAT TTATCCGGCT CACGGAGCGG GCTCCGCTTG TGGCAAGAGC ATGAGTAAAG AAACCAGCGA TACGCTGGGC AATCAGAAAC GGGTCAATTA TGCGCTCCGA GCCGACATGA GCCGGCTGGA ATTTATTCAG GAAGTAACCG ACGGACTAGC CAAACCGCCC CCTTATTTTC CTGAAAACGT CCGCATGAAC CGGGAAGGCT ATGAACAGAT TGACCGCGTG TTGAAACGGG GCGCGCAGCC ACTTAGCCCA CAGGCCTTTG AAGCGGCCGC CAACCAGACG GGTGCGCTCC TGCTGGATAC CCGCGACGCG CAACTCTTCG CTACCGGGTT TGTGCCCAAC GCCATTAATA TTGGCCTGAA TGGGCAGTTT GCTCCCTGGG TAGGCGCACT CATCCCAGAC GTGAGACAGC CAATTTTGCT CATTACAGAA GCGGGCAAAG CGGCTGAATC GCTGGTTCGA TTGGCCCGGG TGGGTTACGA TCAGGTTATT GGCTACCTGG ATGGCGGACT AAACGCCTGG ATCAATGCCG GTCATGAGGT TGACTATATT CCGTCTCTTT CAGCCGATGA AGTGGCCACT CGGTTAGCGC TGGATGAGCT TACCCTCGTG GATGTACGTA AGCCGGGCGA GTTTGCCGCT GAGCACATCG ATGGGGCGAT TAATCTACCC CTTGATACGT TGAATGACAG GATGGCGGAA ATACCAAAAG AAGGGTCGGT CTATGTGCAC TGCGCAGGCG GATACCGCTC CATGATGGCC CTGTCGATTC TGAAGGCCCG TGGCTTCGAT AACCTGATCG ACATTGCCGG TGGGTTTGCC GCTATGCAGC AAACCGGGCG TTTCAACACG ACTAATTTCG TTTGTCCCGC TACCCAGCAG TAA
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Protein sequence | MKIEQIYTGC LSQGTYYIES NGEAAVIDPL REVASYLEKA HSDGATIKYV FETHLHADFV SGHLDLARQA GAPIIYGPNA QTGFESYSAR AGEEFPLGAL TIQVLHTPGH TIESSCYLLL DADRLPIALF SGDTLFIGDV GRPDLAQGSA LTTLDLAGML FDSLRTQIMP LPDNVVIYPA HGAGSACGKS MSKETSDTLG NQKRVNYALR ADMSRLEFIQ EVTDGLAKPP PYFPENVRMN REGYEQIDRV LKRGAQPLSP QAFEAAANQT GALLLDTRDA QLFATGFVPN AINIGLNGQF APWVGALIPD VRQPILLITE AGKAAESLVR LARVGYDQVI GYLDGGLNAW INAGHEVDYI PSLSADEVAT RLALDELTLV DVRKPGEFAA EHIDGAINLP LDTLNDRMAE IPKEGSVYVH CAGGYRSMMA LSILKARGFD NLIDIAGGFA AMQQTGRFNT TNFVCPATQQ
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