Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6871 |
Symbol | |
ID | 8716139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013732 |
Strand | - |
Start bp | 36205 |
End bp | 37209 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_003391619 |
Protein GI | 284005800 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.896751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACTT ACAATTACTT TATCGGCGCT GATATTGGCA AGAAAACGAA TGCAGTTTGT GTCATTGATG CACAGGAAAA ACGTCAACTC GAACTCTCCA TACCCAACAC CAAAGCGGGA ATGGAAGCCT TGCTCAAACA ACTCATTAAG CTACCCCACT TCGGACTGGA AACAACGCTG TTCTGTATGG AACACACGGG GATATATTGC CAGCCAATGA TCAACTTCTT TTATCCTATC GGCGCTAATT TATGGCTGCA ATCAGCGGTT CATATTAAAC GCTCACTAGG CTTAACGCGG GGGAAAACCG ACAAAGCTGA TGCCCGTTTG ATTGCTAAAT ACTGTATCCG CCATCAGCGT GATCAGAGTC TATTTAAGCT GACTGACAAA GTGTTAGCTA CTGTTCGCCA GCTTGCCCAG CAACGGGAAA GGTTAATGGA GATGGCTAAA GCATTCACGG ATTTAAGTCA GGATTACCAG GCAATGGGCC TTTTAGCAGA ACTGAAGCTA CATCAGCAGA CCAGTGAGGT AGCTTTAGTT GCCTTACAAA AACAGATCAA GCTGGTAGAG GCACAAATTG AGGGTCACAT CAAGGCCTCC CCCGAGTTGA AATCGAATAT GGATTTACTG ATGAGCATAC CGGGAGTGGG TCGACAAACG GCCTTGTTTA TGCTCATCTT TACGGGCAAT TTTACTCGCT TTACGGATGC CAAAAAACTG GCCAGCTATG CTGGAGTTGC ACCTTTCGCC TATGAGTCCG GCACTTCGGT GAGGGGCCGA ACGAAGGTCA GTCGAATGGC GAATACCAAA TTGAAACATC TACTGCATAT GGCTGCCTTG GCCGCCGTAA AAGCAAAAGG GGAATTGAGA GATTATTTTG AGCGGAAAGT AGCGGCCGGG AAGCGCAAGA TGAGTGTTTA CAACGCGATC CGTAATAAAT TAGTCCATCG GATGGTAGCC GTCATGGAAA GAAGAACGGC CTACACGGTG GCATTTGAGA AATAG
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Protein sequence | MITYNYFIGA DIGKKTNAVC VIDAQEKRQL ELSIPNTKAG MEALLKQLIK LPHFGLETTL FCMEHTGIYC QPMINFFYPI GANLWLQSAV HIKRSLGLTR GKTDKADARL IAKYCIRHQR DQSLFKLTDK VLATVRQLAQ QRERLMEMAK AFTDLSQDYQ AMGLLAELKL HQQTSEVALV ALQKQIKLVE AQIEGHIKAS PELKSNMDLL MSIPGVGRQT ALFMLIFTGN FTRFTDAKKL ASYAGVAPFA YESGTSVRGR TKVSRMANTK LKHLLHMAAL AAVKAKGELR DYFERKVAAG KRKMSVYNAI RNKLVHRMVA VMERRTAYTV AFEK
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