Gene Slin_6871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6871 
Symbol 
ID8716139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp36205 
End bp37209 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content47% 
IMG OID 
Producttransposase IS116/IS110/IS902 family protein 
Protein accessionYP_003391619 
Protein GI284005800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.896751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTT ACAATTACTT TATCGGCGCT GATATTGGCA AGAAAACGAA TGCAGTTTGT 
GTCATTGATG CACAGGAAAA ACGTCAACTC GAACTCTCCA TACCCAACAC CAAAGCGGGA
ATGGAAGCCT TGCTCAAACA ACTCATTAAG CTACCCCACT TCGGACTGGA AACAACGCTG
TTCTGTATGG AACACACGGG GATATATTGC CAGCCAATGA TCAACTTCTT TTATCCTATC
GGCGCTAATT TATGGCTGCA ATCAGCGGTT CATATTAAAC GCTCACTAGG CTTAACGCGG
GGGAAAACCG ACAAAGCTGA TGCCCGTTTG ATTGCTAAAT ACTGTATCCG CCATCAGCGT
GATCAGAGTC TATTTAAGCT GACTGACAAA GTGTTAGCTA CTGTTCGCCA GCTTGCCCAG
CAACGGGAAA GGTTAATGGA GATGGCTAAA GCATTCACGG ATTTAAGTCA GGATTACCAG
GCAATGGGCC TTTTAGCAGA ACTGAAGCTA CATCAGCAGA CCAGTGAGGT AGCTTTAGTT
GCCTTACAAA AACAGATCAA GCTGGTAGAG GCACAAATTG AGGGTCACAT CAAGGCCTCC
CCCGAGTTGA AATCGAATAT GGATTTACTG ATGAGCATAC CGGGAGTGGG TCGACAAACG
GCCTTGTTTA TGCTCATCTT TACGGGCAAT TTTACTCGCT TTACGGATGC CAAAAAACTG
GCCAGCTATG CTGGAGTTGC ACCTTTCGCC TATGAGTCCG GCACTTCGGT GAGGGGCCGA
ACGAAGGTCA GTCGAATGGC GAATACCAAA TTGAAACATC TACTGCATAT GGCTGCCTTG
GCCGCCGTAA AAGCAAAAGG GGAATTGAGA GATTATTTTG AGCGGAAAGT AGCGGCCGGG
AAGCGCAAGA TGAGTGTTTA CAACGCGATC CGTAATAAAT TAGTCCATCG GATGGTAGCC
GTCATGGAAA GAAGAACGGC CTACACGGTG GCATTTGAGA AATAG
 
Protein sequence
MITYNYFIGA DIGKKTNAVC VIDAQEKRQL ELSIPNTKAG MEALLKQLIK LPHFGLETTL 
FCMEHTGIYC QPMINFFYPI GANLWLQSAV HIKRSLGLTR GKTDKADARL IAKYCIRHQR
DQSLFKLTDK VLATVRQLAQ QRERLMEMAK AFTDLSQDYQ AMGLLAELKL HQQTSEVALV
ALQKQIKLVE AQIEGHIKAS PELKSNMDLL MSIPGVGRQT ALFMLIFTGN FTRFTDAKKL
ASYAGVAPFA YESGTSVRGR TKVSRMANTK LKHLLHMAAL AAVKAKGELR DYFERKVAAG
KRKMSVYNAI RNKLVHRMVA VMERRTAYTV AFEK