Gene Slin_6746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6746 
Symbol 
ID8716012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp110639 
End bp112651 
Gene Length2013 bp 
Protein Length670 aa 
Translation table11 
GC content55% 
IMG OID 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_003391501 
Protein GI284005681 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACG ATCACAACCA CGATGAAGAC GGTCATACCC ACGATGATGT GGAGCTGATT 
GAGGAGGGGA CTACTCCGGC AGCGGATGTA TCACCAAAAG AAGGCCCTTA CCAGACCTGG
CGCACCTATG CCCCGGCTAT TAGTAGTTTA GTATTGCTGC TGGGCGGTAT CGCGCTGGAC
TACTACAAGC TGAGTTGGTT CAACGATCCT GTGCGGCTTA TCTGGTACAT AGTGTCTTAC
CTACCCGTTG CCTGGCCGGT GCTGCGCCGG GCGTGGAGCA GTAGTATCCG GGGGGATGTG
TTCACCGAAT TTTTCTTGAT GAGCGTGGCG ACCCTCGGCG CGTTCTTCAT CCGCGAATAT
CCCGAAGGCG TAGCCGTGAT GCTGTTTTAC ACCATTGGGG AGTTGTTTCA GGAAGCCGCC
GTGCTGCGGG CGCGTCGGTC AATCAAAGCC CTCTTGGACG TGCGACCCGA TGAGGTAACG
GTGCTTAAAA ACGGGAAAGC GCAATTGGTG AAGGCTGCGA CGGTAGCGGT GGGTGATGTG
ATACAAATTA AGCCGGGCGA AAAAGTGGGG CTGGATGGCA CCATGCGTTC AGCCACCGGC
ACGTTCGATA CGGCGGCTTT GACGGGTGAA AGCGTCCCGC GCACCATCGA GAAAAGCGAA
GCGGTGCTGG CGGGCATGAT CAACCGGCAG TCGCTGGTGG AGATGGACGT AACCACGCCC
TATCAGGATT CCAAGCTCTC CCGGATTTTA AAACTGGTCC AACAAGCTAC CGGCCGCAAA
GCAAAGACTC AGGAGTTTAT TGCCCGTTTC GCCAAAATTT ATACGCCGAT CATCTGCTTG
CTGGCGGTGC TCATAACAGG GGTGCCGTAT TTTTTTGTGG CCGATTACCG CTTTGCCGAC
TGGCTCTACC GGGGATTGGT ATTTCTGGTG ATCGGATGCC CCTGCGCGCT GGTTATCTCG
ATCCCTTTGG GTTACTTTGG TGGGATTGGA GCCGGAACTC GACAAGGTAT ACTATTTAAA
GGATCGGTCT TCTTAGACCT GATGACCCAG CTCAAAACGG TCGTCATGGA CAAAACCGGC
ACCCTGACCA AAGGCGTCTT CAAGGTCCAG CAGGTAATGC CCATCGGCAT TACCGCAAAA
GAACTAGTCC GGCTGACGGC GGCTTTAGAA AGCAAATCCA CTCACCCGGT GGCAACGGCG
ATCATCGACC ATGCCCAGCG TGGATTCGCG GATACGGGCC ACGAAACGGT ATCGGTCGAA
GGGGTTGAAG AAATTGCCGG TCACGGCCTG AAAGGGTTAG TGGAAGGCAA AGACATGCTG
GCGGGTAATG CCAAGTTGCT CCGCAAGTTT AACGTCAGCT TCGATGAGGC CCTGACCCAA
ATTCCCTACA CGATTGTGAT GACGGCCATC GACGGCCAAT TTGCGGGTTA TTTCACCATT
GCTGATGAGG TAAAACCCGA TGCTGCCGAA GCAGTGAAAC GCTTGAAAGC GGATGGCATC
CGTACGGTGA TGTTATCGGG TGACAAAAGT GCAGTGGTTG AAGCCATTGC CAAACAGGTG
GGTGTGGACG AGTGGTACGG CGATTTACTG CCGGAAGACA AGGTAGCCCA GGTTGAACGG
CTTAAAGCCG AGTTGGCAGG CAATCCAAAG CGAAGCGTCG CCCGGGCCAA GCTGGCCTTC
GTCGGCGACG GGGTGAACGA CGCGCCAGTG GTTGCGCTGG CCGACGTCGG CATGGCCATG
GGTGGTCTTG GTTCCGATGC GACCATAGAA ACCGCCGACG TGATTATTCA AAACGATGAA
CCCTCGAAAA TTGCTATGGC CATTGACATT GGCCGGGCCA CTCGCCGGAT TGTGTGGCAG
AATATCACCT TGTCGATGGT AGTTAAAATC ATCGTGCTGG TGTTGGGTGC GGGTGGCCTG
GCGACCATGT GGGAAGCAGT CTTCGCCGAC GTAGGCGTAG CGATGCTGGC TATCCTGAAC
GCCGTGCGGG TGCAGAATCT TAAGTTTAAG TGA
 
Protein sequence
MANDHNHDED GHTHDDVELI EEGTTPAADV SPKEGPYQTW RTYAPAISSL VLLLGGIALD 
YYKLSWFNDP VRLIWYIVSY LPVAWPVLRR AWSSSIRGDV FTEFFLMSVA TLGAFFIREY
PEGVAVMLFY TIGELFQEAA VLRARRSIKA LLDVRPDEVT VLKNGKAQLV KAATVAVGDV
IQIKPGEKVG LDGTMRSATG TFDTAALTGE SVPRTIEKSE AVLAGMINRQ SLVEMDVTTP
YQDSKLSRIL KLVQQATGRK AKTQEFIARF AKIYTPIICL LAVLITGVPY FFVADYRFAD
WLYRGLVFLV IGCPCALVIS IPLGYFGGIG AGTRQGILFK GSVFLDLMTQ LKTVVMDKTG
TLTKGVFKVQ QVMPIGITAK ELVRLTAALE SKSTHPVATA IIDHAQRGFA DTGHETVSVE
GVEEIAGHGL KGLVEGKDML AGNAKLLRKF NVSFDEALTQ IPYTIVMTAI DGQFAGYFTI
ADEVKPDAAE AVKRLKADGI RTVMLSGDKS AVVEAIAKQV GVDEWYGDLL PEDKVAQVER
LKAELAGNPK RSVARAKLAF VGDGVNDAPV VALADVGMAM GGLGSDATIE TADVIIQNDE
PSKIAMAIDI GRATRRIVWQ NITLSMVVKI IVLVLGAGGL ATMWEAVFAD VGVAMLAILN
AVRVQNLKFK