Gene Slin_6742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6742 
Symbol 
ID8716008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp104659 
End bp105249 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content53% 
IMG OID 
ProductHeavy metal transport/detoxification protein 
Protein accessionYP_003391497 
Protein GI284005677 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.685267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG CAGGATTGAC CGGGCTACTC ACCGCCTTTG TTTCTTCGCT CTGTTGCACT 
GCCCCTTTGC TCACTTTGCT GGTGGGTGCC ACCGGCTCGG CGGGTGGATG GGCCTGGTTG
GAGCCTTTGC GGCCTTACAG TATCGCGCTT ACGGTGGGCG CGTTGGGTTG GGCCTGGTAT
GAACAATTAA AACCCAAAAA AACGATGGCC TGTAATTGCG AAACGAAGAA AACCGCCTTC
TGGCAAACGA AGCCATTTTT GGGCTTGATG ACGGGAATGG CCTTGCTACT ACTGGCTTTC
CCCTCTTACT CAAACTGGCT GTACCAGGAT AAGAATCAAG CAACTGTACA GCCCGCGCAG
AAGGGTAGTG GGCAAGTGGC TTATGTGACC ATCAAAGGCA TGTCCTGCGA AGGCTGCGAA
CAGCACATCA AGCAGGAGGT CACCAAGATC AAGGGCGTTT CGGCGGTGGA TGTGTCGTAC
CAAAAAGGGG CAGCTACGGT GAAATACGAC AGTAAAAAAA CCTCACTGGC CGACATCAAA
AAAGCGGTGG ATGCCACGGG CTACAAAGTT ACCAGCACAA AAACGCTTTA A
 
Protein sequence
MKLAGLTGLL TAFVSSLCCT APLLTLLVGA TGSAGGWAWL EPLRPYSIAL TVGALGWAWY 
EQLKPKKTMA CNCETKKTAF WQTKPFLGLM TGMALLLLAF PSYSNWLYQD KNQATVQPAQ
KGSGQVAYVT IKGMSCEGCE QHIKQEVTKI KGVSAVDVSY QKGAATVKYD SKKTSLADIK
KAVDATGYKV TSTKTL