Gene Slin_6640 details

Gene Information

• Locus tag: Slin_6640
• ID: 8730426
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: -
• Start bp: 8074974
• End bp: 8077148
• Gene Length: 2175 bp
• Protein Length: 724 aa
• Translation table: 11
• GC content: 56%
• Product: methylmalonyl-CoA mutase, large subunit
• Protein accession: YP_003391396
• Protein GI: 284041466

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 31
• Fosmid unclonability p-value: 0.70273
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGACCCG ATTTCAAAAC CATACAACCG TCCCCGGCGG CCGGTAATGC ATTACCCGAC 
GATCAACTCT CGTCCGTGCG TTCCGACCGC GCCTTCCCGA CCGCCGAAGG CATCAAATTA 
AAGCCGCGCT TTACCGTTGC CGATCTTGAC GAAGCAGATC ACCTGAACTA TGCCGCCGGC 
ATTCCGCCGT TTCTGCGGGG TCCATACGCC AGCATGTACG TCCGTCAGCC CTGGACAATC 
CGCCAGTATG CCGGCTTCTC GACTGCCGAA GCCTCAAACG CTTTTTACCG GCGTAATCTG 
GCCGCCGGTC AGAAGGGTTT ATCGGTAGCA TTTGATTTGG CCACACACCG GGGTTATGAC 
TCAGACCACC CGCGCGTGGT GGGCGACGTA GGCAAGGCCG GGGTCGCCAT CGACTCGGTC 
GAGGATATGA AAATCCTGTT CGACCAGATT CCCCTCGATC AGATGTCGGT GTCGATGACC 
ATGAACGGGG CTGTGCTGCC CATTATGGCC TTTTTTATCG TAGCCGCCGA AGAACAGGGC 
GTTTCACCGG AAAAACTGGC AGGTACCATC CAAAATGACA TCCTGAAAGA GTTCATGGTG 
CGGAATACCT ACATCTACCC ACCGGAGCCG TCCATGCGCC TTGTGGGCGA TATATTTTCG 
TACACGGCGC AGCACATGCC CAAGTTCAAC TCTATCAGCA TCAGCGGTTA CCACATGCAC 
GAGGCCGGAG CCCCGGCACA GCTTGAACTG GCCTACACCC TGGCCGATGG ACTTGAATAC 
ATCCGAACGG GCCTGCGGGC GGGCATGGGC ATCGACGATT TCGCTCCGCG CCTGTCGTTC 
TTCTGGGGTA TTGGCATGAA TCACTTCATG GAGATTGCCA AGCTCCGGGC GGGTCGATTA 
CTCTGGGCCA AAATTGTAAA GCAGTTCGCC CCGAAAAACG CAAAGTCACT CGCCTTACGC 
ACCCACTGCC AGACCTCAGG CTACAGCCTC ACCGAGCAGG ATCCATTCAA CAATGTAGCC 
CGAACAACCA TCGAAGCCAT GGCTGCGGTG CTGGGCGGCA CGCAGAGTCT GCATACCAAC 
TCGCTTGACG AAGCCATTGC GCTGCCAACC GATTTTTCGG CTCGCATTGC CCGAAACACC 
CAGCTTTATT TACAGCACGA AACCGACATT ACCCGCGCTG TCGACCCCTG GGGCGGATCG 
TATTATATCG AATACCTGAC CAAAGAACTG GTCGAAAAAG CGTGGGCGCT TATTGAAGAA 
GTAGAACAAC TGGGCGGCAT GACCAAAGCC ATTGAAACAG GTCTGCCCAA ACTCCGGATT 
GAAGAAGCCG CAGCCCGAAA ACAGGCCCGC ATCGATTCCG GCAAAGACAT AATTGTGGGT 
GTCAATCGGT ACAAGCCTTC TTCGGAAACA GACATCGAAT TACTCGACAT CGATAACAAA 
GCGGTACGCG AAAGCCAGCT GAACCGACTC AAAGACGTTC GGGCGAAACG GGATGATCAG 
AAAGTGGAGC AGGCCCTAAA TGCCATAACC GAAGCAGCTA TGACCCCGTC CCAACCCTCC 
GCCGAGACTG ATGGGAGCCG AAAAAATCTC CTGGCACTCG CCGTAGAAGC AGCCCGGCAC 
CGCGCCACTC TTGGGGAAAT TTCTGACGCT ATGGAAAAGG CATTTGGCCG CCATAAGGCC 
ACCATCCGAG CCGTATCCGG CATTTACTCG GCCGAAGTGT CGGACGATGA AAACTTCCGC 
ATCGCCCGCG AAATGAGCGA CAAATTTGCC GAACTCGACG GTCGACGCCC CCGGATTCTG 
GTCGCCAAGA TGGGGCAGGA CGGCCACGAC CGGGGCGCCA AAATCATTGC CACCAGTTTC 
GCCGACCTTG GCTTCGACGT GGATATGGGG CCGCTGTTTC AAACGCCGGA CGAAGTAGCC 
CGGCAGGCGG CCGAAAACGA CGTGCATATT GTGGGCGTAT CGAGTTTGGC CGCCGGGCAT 
AAAACGCTGG TACCGCAACT CATCGATGAA CTGAAAAAGA TTGGCCGCGA CGATATTATG 
GTCATTGCCG GGGGCGTCAT TCCGGCGGGC GATTACCAGT ATCTGTACGA TGCGGGCGTT 
AAAGGCGTAT TTGGGCCGGG TACGGTGATC TCGGTAGCGG CTCAGAAAAT TCTTGACGAA 
CTAATGGCAG AGTGA 

 

Protein sequence

MRPDFKTIQP SPAAGNALPD DQLSSVRSDR AFPTAEGIKL KPRFTVADLD EADHLNYAAG 
IPPFLRGPYA SMYVRQPWTI RQYAGFSTAE ASNAFYRRNL AAGQKGLSVA FDLATHRGYD 
SDHPRVVGDV GKAGVAIDSV EDMKILFDQI PLDQMSVSMT MNGAVLPIMA FFIVAAEEQG 
VSPEKLAGTI QNDILKEFMV RNTYIYPPEP SMRLVGDIFS YTAQHMPKFN SISISGYHMH 
EAGAPAQLEL AYTLADGLEY IRTGLRAGMG IDDFAPRLSF FWGIGMNHFM EIAKLRAGRL 
LWAKIVKQFA PKNAKSLALR THCQTSGYSL TEQDPFNNVA RTTIEAMAAV LGGTQSLHTN 
SLDEAIALPT DFSARIARNT QLYLQHETDI TRAVDPWGGS YYIEYLTKEL VEKAWALIEE 
VEQLGGMTKA IETGLPKLRI EEAAARKQAR IDSGKDIIVG VNRYKPSSET DIELLDIDNK 
AVRESQLNRL KDVRAKRDDQ KVEQALNAIT EAAMTPSQPS AETDGSRKNL LALAVEAARH 
RATLGEISDA MEKAFGRHKA TIRAVSGIYS AEVSDDENFR IAREMSDKFA ELDGRRPRIL 
VAKMGQDGHD RGAKIIATSF ADLGFDVDMG PLFQTPDEVA RQAAENDVHI VGVSSLAAGH 
KTLVPQLIDE LKKIGRDDIM VIAGGVIPAG DYQYLYDAGV KGVFGPGTVI SVAAQKILDE 
LMAE